Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., two component, sigma54 specific, transcriptional regulator, Fis family from Marinobacter adhaerens HP15

 Score =  207 bits (527), Expect = 7e-58
 Identities = 111/323 (34%), Positives = 185/323 (57%), Gaps = 18/323 (5%)

Query: 206 VGVSNRHKSLMSQAKKLAMLDQPLLIEGETGTGKEMLAKACHNRSDRSSAPFLVLSCASM 265
           +G S   + L +Q +KLA    P+ I GE+G+GKE++A+  H +  R   PF+ ++C ++
Sbjct: 139 LGKSPEIRKLRNQTRKLARSQAPVFISGESGSGKELVARMIHLQGPRREGPFIAVNCGAI 198

Query: 266 PDDVAETELFGHAPGSFNHQQGHK-GIFEQANGGTVFLDEIGEMSPHLQIKLLRFLQDGT 324
           P ++ E+E FGH  GSF     +K G+F  ANGGT+FLDE+ ++   +Q+KLLR +Q+  
Sbjct: 199 PSELMESEFFGHKKGSFTGAVENKDGLFRSANGGTLFLDEVADLPLAMQVKLLRAIQEKA 258

Query: 325 FRRVGEEHEIHVDVRVIASTRHNLADLAESRRFREDLFYRLNVLTLRIPPLRERPSDVQP 384
            R VG+  E+ VD+RV+++T  NL +L +   FR+DLFYR+NV+ L +PPLRERP D+  
Sbjct: 259 VRPVGDTKEVPVDIRVLSATHKNLPELVQEGSFRQDLFYRINVIELSVPPLRERPDDISL 318

Query: 385 LLELFITKHCNKLGMLKPKLTDDLLDKLSQYQWPGNMRQLDNMVLRALTEIEGDVLGIEP 444
           L    + +   +       LT   +D+L  Y +PGN+R+L+N++ RA T  + D +  + 
Sbjct: 319 LSNHILERIAKEYECDPASLTPAAVDRLRSYDFPGNVRELENVLERAFTLCDADQIDADD 378

Query: 445 FHLPQ-VDSVSSAPSINLDGSLDD---------------IMKEYESQVLDRLFQSFP-SS 487
            HL   V   +SA  I  +G + D                +++ E Q +++  ++   + 
Sbjct: 379 LHLGNGVQHAASASQIIAEGQVGDGEGIAVPDGEIDLEGYLEKIERQAIEKALEATRWNK 438

Query: 488 RKLAKRLNVSHTSIANKLRDYGI 510
              AKRL +S  ++  +L+  G+
Sbjct: 439 TAAAKRLGISFRALRYRLKKLGM 461