Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 524 a.a., nif-specific transcriptional activator NifA from Klebsiella michiganensis M5al

 Score =  204 bits (519), Expect = 6e-57
 Identities = 119/300 (39%), Positives = 176/300 (58%), Gaps = 22/300 (7%)

Query: 189 TSTTQIPLQS-------------NLGFEHFVGVSNRHKSLMSQAKKLAMLDQPLLIEGET 235
           TS  Q P QS               G E+ VG S   + +M   ++++  D  +L+ GE+
Sbjct: 183 TSAAQAPQQSPRIERPRACTPSRGFGLENMVGKSPAMRQIMDIIRQVSRWDTTVLVRGES 242

Query: 236 GTGKEMLAKACHNRSDRSSAPFLVLSCASMPDDVAETELFGHAPGSFNHQ-QGHKGIFEQ 294
           GTGKE++A A H+ S R++A F+  +CA++PD++ E+ELFGH  G+F    +  KG FE 
Sbjct: 243 GTGKELIANAIHHNSPRAAAAFVKFNCAALPDNLLESELFGHEKGAFTGAVRQRKGRFEL 302

Query: 295 ANGGTVFLDEIGEMSPHLQIKLLRFLQDGTFRRVGEEHEIHVDVRVIASTRHNLADLAES 354
           A+GGT+FLDEIGE S   Q KLLR LQ+G   RVG +  + V+VR+IA+T  +L +    
Sbjct: 303 ADGGTLFLDEIGESSASFQAKLLRILQEGEMERVGGDETLRVNVRIIAATNRHLEEEVRL 362

Query: 355 RRFREDLFYRLNVLTLRIPPLRERPSDVQPLLELFITKHCNKLGMLKPKLTDDLLDKLSQ 414
             FREDL+YRLNV+ + +PPLRER  D+  L    + K  +  G    +++D  +  L +
Sbjct: 363 GHFREDLYYRLNVMPIALPPLRERQEDIAELAHFLVRKIAHSQGRTL-RISDGAIRLLME 421

Query: 415 YQWPGNMRQLDNMVLRA--LTE---IEGDVLGIEPFHLPQVDSVSSAPSIN--LDGSLDD 467
           Y WPGN+R+L+N + R+  L+E   I+ DV+       P     SS P+ +  LD SLD+
Sbjct: 422 YSWPGNVRELENCLERSAVLSESGLIDRDVILFNHRDNPPKALASSGPAEDGWLDNSLDE 481