Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  222 bits (565), Expect = 3e-62
 Identities = 128/323 (39%), Positives = 189/323 (58%), Gaps = 10/323 (3%)

Query: 196 LQSNLGFEHFVGVSNRHKSLMSQAKKLAMLDQPLLIEGETGTGKEMLAKACHNRSDRSSA 255
           L+   G    +G S   + ++    + A     +LI GE+GTGKE++A+A H  S R+S 
Sbjct: 136 LEERYGTHQIIGRSKAIREVLDMVDRAAPSRSTVLITGESGTGKELVARAIHFSSPRNSG 195

Query: 256 PFLVLSCASMPDDVAETELFGHAPGSFNHQQG-HKGIFEQANGGTVFLDEIGEMSPHLQI 314
           PF+ ++C ++   V E+ELFGH  GSF       +G FEQA+GGT+FLDEIGE++P LQ+
Sbjct: 196 PFVSVNCMALNPGVLESELFGHEKGSFTGAMAMRRGRFEQADGGTLFLDEIGELTPELQV 255

Query: 315 KLLRFLQDGTFRRVGEEHEIHVDVRVIASTRHNLADLAESRRFREDLFYRLNVLTLRIPP 374
           KLLR LQ+  F RVG   EI VD+RV+A+T  +L    E+  FREDL+YRLNV+ + +PP
Sbjct: 256 KLLRVLQERRFERVGGGDEIEVDIRVVAATNKDLQKEVENGTFREDLYYRLNVVHVALPP 315

Query: 375 LRERPSDVQPLLELFITKHCNKLGMLKPKLTDDLLDKLSQYQWPGNMRQLDNMVLRALTE 434
           LRER  D+  L+  F+ K     GM     T +  D L+ Y+WPGN+RQL N+V R L  
Sbjct: 316 LRERREDIPLLVGHFVEKLARDNGMKPKTFTPEAHDYLTGYEWPGNIRQLQNVVERCLVL 375

Query: 435 IEGDVLGIEPF------HLPQVDSVSSAPSINLDGSLDDIMKEYESQVLDR-LFQSFPSS 487
           +  D +G++           Q+ S      + LD  L D +++ E+ ++ R L ++    
Sbjct: 376 VASDTVGVDDLPPEIRDEESQLKSAVDLLPVRLD--LADTLEKIEAALIRRALVRAEFVQ 433

Query: 488 RKLAKRLNVSHTSIANKLRDYGI 510
            K A+ L +S + +  KL+ YGI
Sbjct: 434 VKAAELLGISKSLLQYKLKKYGI 456