Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., sigma-54 dependent transcriptional regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  203 bits (516), Expect = 9e-57
 Identities = 105/245 (42%), Positives = 150/245 (61%), Gaps = 3/245 (1%)

Query: 206 VGVSNRHKSLMSQAKKLAMLDQPLLIEGETGTGKEMLAKACHNRSDRSSAPFLVLSCASM 265
           +G S     +     K+A  D  +L+ GE+GTGKE+L +A H  S R+  PF+ ++C ++
Sbjct: 9   IGQSTTLCQVFRMLGKVAPTDSTVLVTGESGTGKELLVRALHANSQRAQQPFVPINCGAI 68

Query: 266 PDDVAETELFGHAPGSFNHQ-QGHKGIFEQANGGTVFLDEIGEMSPHLQIKLLRFLQDGT 324
           P D+ E+ELFGH  G+F H  +   G FE A+GGT+FLDEIGEM   LQ+K+LR LQ+  
Sbjct: 69  PKDLLESELFGHEKGAFTHAIRSRPGRFELADGGTIFLDEIGEMDLMLQVKILRVLQEKE 128

Query: 325 FRRVGEEHEIHVDVRVIASTRHNLADLAESRRFREDLFYRLNVLTLRIPPLRERPSDVQP 384
             RVG      VDVR++A+T  +L     + RFREDL+YRLNV+ L +PPLRER  D+  
Sbjct: 129 IERVGGTGTKKVDVRIVAATNRDLEREVAAGRFREDLYYRLNVIPLHLPPLRERGGDILV 188

Query: 385 LLELFITKHCNKLGMLKPKLTDDLLDKLSQYQWPGNMRQLDNMVLRALTEIEGDVLGIEP 444
           L E F+ + C +    +  L  D    L+ Y WPGN+R+L+N + R     EGD+  ++P
Sbjct: 189 LAEHFLERFCERKQRARLALAPDTRKVLAAYSWPGNIRELENFMERVSILAEGDI--VDP 246

Query: 445 FHLPQ 449
             LP+
Sbjct: 247 ADLPR 251