Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., sigma-54 dependent transcriptional regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  206 bits (523), Expect = 2e-57
 Identities = 120/305 (39%), Positives = 181/305 (59%), Gaps = 16/305 (5%)

Query: 213 KSLMSQAKKLAMLDQPLLIEGETGTGKEMLAKACHNRSDRSSAPFLVLSCASMPDDVAET 272
           + ++   +++A  D  +LI GETG GK++ A+  H  S RSS  FL + C S+ +++ E+
Sbjct: 156 QQVLDLLQRVAATDANILILGETGVGKDVFARLAHEYSPRSSKMFLKVDCGSIAENLIES 215

Query: 273 ELFGHAPGSFN--HQQGHKGIFEQANGGTVFLDEIGEMSPHLQIKLLRFLQDGTFRRVGE 330
           ELFG+ PG+F+    +G  G FE A+GGTVFLDEIGE+   +Q KLLR LQD    RVG 
Sbjct: 216 ELFGYVPGAFSGASSKGKAGYFEIADGGTVFLDEIGELPLPMQAKLLRVLQDREVMRVGS 275

Query: 331 EHEIHVDVRVIASTRHNLADLAESRRFREDLFYRLNVLTLRIPPLRERPSDVQPLLELFI 390
                VDVR+IA+T  +LA+ A++ +FR DL+YRLNV  L +PPLRER  D+ PL+E F+
Sbjct: 276 SQARKVDVRIIAATNRDLAEDAKAGKFRSDLYYRLNVAVLDLPPLRERQQDIIPLVERFL 335

Query: 391 TKHCNKL--GMLKPKLTDDLLDKLSQYQWPGNMRQLDNMVLRALTEIEGDVLGIEPFHLP 448
            +   K    M  PK T      L  Y+WPGN+R++ N++   +   EG    I+P HLP
Sbjct: 336 DRFNAKYRRNMTLPKGT---RQALQNYKWPGNVREMQNLIQSLVVTCEGH--SIKPEHLP 390

Query: 449 -------QVDSVSSAPSINLDGSLDDIMKEYESQVLDRLFQSFPSSRKLAKRLNVSHTSI 501
                  +  +  + P+ +    L +IM + E ++L+   ++  S  K+A+   +S T++
Sbjct: 391 PHIQKAARNRTAYTPPAPDDARPLKEIMADIEREILEEAVRTHGSVCKVARMYKISRTTL 450

Query: 502 ANKLR 506
             KLR
Sbjct: 451 FRKLR 455