Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 551 a.a., sigma-54 dependent transcriptional regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  210 bits (535), Expect = 9e-59
 Identities = 103/236 (43%), Positives = 159/236 (67%), Gaps = 1/236 (0%)

Query: 215 LMSQAKKLAMLDQPLLIEGETGTGKEMLAKACHNRSDRSSAPFLVLSCASMPDDVAETEL 274
           +++Q   +A  D  +L++GE+GTGKE++A+A H RS RS+AP + ++C+++P ++ E+E 
Sbjct: 235 VLAQVDMVAPTDATVLVQGESGTGKELVAEAIHRRSQRSTAPLVRVNCSAIPRELFESEF 294

Query: 275 FGHAPGSFNHQQGHK-GIFEQANGGTVFLDEIGEMSPHLQIKLLRFLQDGTFRRVGEEHE 333
           FGH  G+F      + G F+ A+GGT+FLDE+GE+   LQ KLLR LQ+GTF RVGE+  
Sbjct: 295 FGHVKGAFTGAVRDRIGRFQMADGGTLFLDEVGEIPLELQGKLLRVLQEGTFERVGEDRT 354

Query: 334 IHVDVRVIASTRHNLADLAESRRFREDLFYRLNVLTLRIPPLRERPSDVQPLLELFITKH 393
             VDVR+IA+T  +L    ++ RFR+DLF+RL+V  + +PPLR+R  D+  L   FI + 
Sbjct: 355 RSVDVRIIAATNRDLRQEVDAGRFRQDLFFRLSVFPVELPPLRDRQGDIPLLARHFIAQS 414

Query: 394 CNKLGMLKPKLTDDLLDKLSQYQWPGNMRQLDNMVLRALTEIEGDVLGIEPFHLPQ 449
             +LG+  P+LT   L +LS Y WPGN+R++ N++ RA+   E   LG++    P+
Sbjct: 415 SRRLGLPTPRLTPAALARLSAYPWPGNVREMQNVIERAVIMAEEGALGMDALPAPE 470