Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  210 bits (535), Expect = 8e-59
 Identities = 126/320 (39%), Positives = 183/320 (57%), Gaps = 16/320 (5%)

Query: 206 VGVSNRHKSLMSQAKKLAMLDQPLLIEGETGTGKEMLAKACHNRSDRSSAPFLVLSCASM 265
           VG S   +S+      +A  D  +LI GE+GTGKEM+A+  H  S R   PFL L+C ++
Sbjct: 148 VGESPAMQSVRRTVATVAPSDYTVLIRGESGTGKEMVARMVHRLSPRVDEPFLALNCPAI 207

Query: 266 PDDVAETELFGHAPGSFNH-QQGHKGIFEQANGGTVFLDEIGEMSPHLQIKLLRFLQDGT 324
           P+ + E+ELFGH  G+F   ++  KG+F  A+GGTV LDEIG++S ++Q KLLRFLQ+G 
Sbjct: 208 PEHLLESELFGHVRGAFTGAERDRKGLFSIADGGTVLLDEIGDISSNIQTKLLRFLQEGE 267

Query: 325 FRRVGEEHEIHVDVRVIASTRHNLADLAESRRFREDLFYRLNVLTLRIPPLRERPSDVQP 384
            R VG     HVDVR+IAST  +L     SR FREDLFYRLNV+T+ +PPLRER SD+  
Sbjct: 268 VRPVGSPRNEHVDVRIIASTNQDLEARMASRDFREDLFYRLNVVTIWVPPLRERLSDIPL 327

Query: 385 LLELFITKHCNKLGMLKPKLTDDLLDKLSQYQWPGNMRQLDNMVLRALTEIEGDVLGIEP 444
           L   F+ +   +LG+ +    + +LD L + +WPGN+R+L N V R      GD + ++ 
Sbjct: 328 LAATFLARASRELGVPQRDFDEGVLDHLMRREWPGNVRELQNYVRRLALFSRGDGITLDA 387

Query: 445 FHLPQVDSVSSAPS-------------INLDGSLDDIMKEYESQVLDRLFQSFPSSRKLA 491
               +  S S AP+             +    +   +++ +  + L  L +S   +   A
Sbjct: 388 VQQAE-QSESGAPAALCVPSPVAEGEVMPYKDAKASLVESFSERYLRDLLESTGGNVTEA 446

Query: 492 KRLN-VSHTSIANKLRDYGI 510
            RL+ +S  SI   +  YGI
Sbjct: 447 ARLSGLSRVSIQKMVARYGI 466