Pairwise Alignments

Query, 339 a.a., TIGR01620 family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  183 bits (464), Expect = 7e-51
 Identities = 125/350 (35%), Positives = 198/350 (56%), Gaps = 22/350 (6%)

Query: 4   LKTKQIF-SEPLQGSLETPSLTAQQQFSAQEKFVPMNMEVPAEEALEAELDTI----IRP 58
           LK +Q+F S+ ++    +  L + Q F+ Q     ++  V  ++AL A    +    IRP
Sbjct: 31  LKKQQVFDSDKVKLQSASDELKSAQAFAPQTPLKAVDEVV--DDALAAHPQALDVSSIRP 88

Query: 59  S--KGRKWFAGGLFAAFSGLVAWQAIDSVVQAIQDLDWLSLGWVGFISALATLGL----- 111
           +  + R+W     F+ F GL+    + + +  ++D  WL+  W+ F    A LGL     
Sbjct: 89  TLHQSRRWSWLARFSVF-GLLLLVLVQTGL-GLRDA-WLASPWL-FSFYGAVLGLVGSWA 144

Query: 112 --GAIAKELWKLRRLRQHFSVQEQAQILMENDAVCQGQAFCEQIAKQGKVDKQGYQRWLS 169
             GA+  E  KL+RL+Q    QE    L  +  + +   F   I +    D QG QR   
Sbjct: 145 MVGALG-EYRKLKRLKQVADTQESGARLALSMQMGEADGFINNIVRHYP-DSQGLQRLRQ 202

Query: 170 ALNSSHSDAEILDLYDALVVGEQDKQASQIVTRYATEAAALVAISPLAIADMLLVAWRNF 229
           +L   H+DAE + L++ LV+ E+D+ A +IV RYA E+A L+A SPLA  DM ++ WRN 
Sbjct: 203 SLKDEHNDAEKVLLFEDLVLTERDELAKKIVRRYAAESAVLLAASPLAALDMAIILWRNQ 262

Query: 230 SMVDQLAKVYGVELGYWSRIKLFKAVLLNMALAGASELAVDASVDLFSMDLAGRLSARAG 289
            M+  +A  YG+ELGYWSRIKL +++++N+  AG SEL  D    L S+++ G+LSAR  
Sbjct: 263 RMLRDVAACYGIELGYWSRIKLIRSIIMNIIYAGTSELVTDLGTQLLSVEMTGKLSARLA 322

Query: 290 QGVGVGILTARLGIKAVGLLRPLPWHPDRQLKLSAVRKQVVSKVAALLAK 339
           QG+G G+LTARLG +A+ L RP+ +  +++ KLS V ++++ ++     K
Sbjct: 323 QGLGGGLLTARLGYQAMALCRPIQFREEQRPKLSKVHQELLIELKQFAGK 372