Pairwise Alignments

Query, 417 a.a., serine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., amino acid transporter, transmembrane (RefSeq) from Shewanella amazonensis SB2B

 Score =  459 bits (1181), Expect = e-134
 Identities = 221/412 (53%), Positives = 298/412 (72%), Gaps = 6/412 (1%)

Query: 9   STARSASKWTYKDFTWALSLFGTAVGAGVLFLPIKAGAGGFWPLVLLALIAAPMTWFAHK 68
           +T  +A  WT +D TW LSLFGTAVGAG+LFLPI AG GGFWPLV++AL+  PMT+ AH+
Sbjct: 25  ATPNNAMPWTAQDTTWMLSLFGTAVGAGILFLPINAGMGGFWPLVVMALLIGPMTYLAHR 84

Query: 69  SLARFVLSAKNPDADITDTVEEHFGKAGANLITFAYFFAIYPIVLIYGVGITNTVDSFLV 128
            L+RFV S+    +DIT  VEEHFGK     IT  YFFAIYPIVLIYGVGITN VDSF+V
Sbjct: 85  GLSRFVCSSSIAGSDITQVVEEHFGKGAGKAITVLYFFAIYPIVLIYGVGITNVVDSFMV 144

Query: 129 NQIGMESIPRWLLSGALITAMTAGVVFGKELMLKATSAMVYPLVFILLALSFYLIPDWNT 188
           NQ+G+ES+PRWLLSG LI  M + +V G+++MLK T  +VYPLV IL  +S YL+P+WN 
Sbjct: 145 NQLGLESLPRWLLSGVLILGMMSVMVAGEKIMLKVTQFLVYPLVAILAFMSLYLMPNWNL 204

Query: 189 SMMEVAPDWSAMPAIVWLAIPIIVFSFNHSPIISQFSKEQRQQFGDKAVQKTDMITGGAA 248
           + ++  P        +WL IP+++F+FNHSP ISQF+   ++  G  A +K D+I    A
Sbjct: 205 AAVKEVPAVGDFLGTIWLTIPVLIFAFNHSPAISQFAVSLKRDHGSNASRKADIILRNTA 264

Query: 249 MMLMGFVMFFVFSVVLSLSPAELAMAKEQNISVLSYLANEHASPIISYLGPIVAFAAITS 308
           MML+GFVM FVFS VLSLSPA+LA AK QN+ +LSYLAN   S  +SY GP +AF AI S
Sbjct: 265 MMLVGFVMLFVFSCVLSLSPAQLAEAKSQNLPILSYLANVFDSGFVSYFGPFIAFVAIVS 324

Query: 309 SYFGHFLGAHEGLVGLVKSR-----SNMQVSKIEKISLGFIVITTWIVAIVNPSILGMIE 363
           S+FGH++GA EG+ G++K +       +   K+ +  LGF+ +T W VA++NPSILGMIE
Sbjct: 325 SFFGHYMGASEGMSGIIKKQLEGKGKPVDEGKLNRFILGFMFLTIWAVAVINPSILGMIE 384

Query: 364 TMGAPMIAAILFLLPVFAMHKVPAMAKFKTSAPVQIFTVICGLAAISSVIYG 415
            +G P+IAAIL+L+P++A+++VPA+  ++      IF +I GL ++++++YG
Sbjct: 385 ALGGPIIAAILYLMPMYAVYRVPALKAYRGRIS-NIFVIIAGLLSMTAILYG 435