Pairwise Alignments

Query, 417 a.a., serine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., serine transporter, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  452 bits (1164), Expect = e-132
 Identities = 229/417 (54%), Positives = 295/417 (70%), Gaps = 9/417 (2%)

Query: 9   STARSASK---WTYKDFTWALSLFGTAVGAGVLFLPIKAGAGGFWPLVLLALIAAPMTWF 65
           ST  S ++   WT +D TW LSLFGTAVGAG+LFLPI AG GGFWPLVL+A+I  PMT+ 
Sbjct: 14  STQESTTRRLPWTRQDTTWMLSLFGTAVGAGILFLPINAGMGGFWPLVLMAIIIGPMTYL 73

Query: 66  AHKSLARFVLSAKNPDADITDTVEEHFGKAGANLITFAYFFAIYPIVLIYGVGITNTVDS 125
           AH+ L+RFV S+  P +DIT  VEEHFG      IT  YF AIYPIVLIYGVGITNTVDS
Sbjct: 74  AHRGLSRFVCSSSIPGSDITQVVEEHFGIGAGKAITLLYFLAIYPIVLIYGVGITNTVDS 133

Query: 126 FLVNQIGMESIPRWLLSGALITAMTAGVVFGKELMLKATSAMVYPLVFILLALSFYLIPD 185
           F+VNQ+GM S PR+LLSG LI  M A +V G++ MLK T  +VYPLV IL  +S YLIP+
Sbjct: 134 FIVNQLGMASPPRFLLSGILIFGMMAVMVAGEQFMLKVTQLLVYPLVGILAFMSVYLIPE 193

Query: 186 WNTSMMEVAPDWSAMPAIVWLAIPIIVFSFNHSPIISQFSKEQRQQFGDKAVQKTDMITG 245
           W    ++V P+  A    VWL IP++VF+FNHSP ISQFS   ++  G  A +K D+I  
Sbjct: 194 WKMDALQVVPETGAFLGTVWLTIPVLVFAFNHSPAISQFSVSLKRDHGANAARKADVILR 253

Query: 246 GAAMMLMGFVMFFVFSVVLSLSPAELAMAKEQNISVLSYLANEHASPIISYLGPIVAFAA 305
             +MML+GFVM FVFS VLSLSP +LA AK +N+ +LSYLAN H S  +SY GP +AF A
Sbjct: 254 NTSMMLVGFVMLFVFSCVLSLSPEQLAEAKAKNLPILSYLANVHDSGFVSYFGPFIAFIA 313

Query: 306 ITSSYFGHFLGAHEGLVGLV-----KSRSNMQVSKIEKISLGFIVITTWIVAIVNPSILG 360
           I SS+FGH++GA EG+ G++      S+  +   K+ K  L F+  T W VAI NPSILG
Sbjct: 314 IVSSFFGHYMGATEGMKGIIVKQLRSSKKQVSEDKLNKFILVFMFATIWGVAIKNPSILG 373

Query: 361 MIETMGAPMIAAILFLLPVFAMHKVPAMAKFKTSAPVQIFTVICGLAAISSVIYGAL 417
           MIE +G P+IAAIL+L+P++A++KVPA+  ++      +F VI GL A++++++G L
Sbjct: 374 MIEALGGPVIAAILYLMPMYAVYKVPALKAYRHRIS-NVFVVIAGLLAMTAILFGLL 429