Pairwise Alignments

Query, 417 a.a., serine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., serine transporter, putative (RefSeq) from Shewanella sp. ANA-3

 Score =  458 bits (1178), Expect = e-133
 Identities = 232/417 (55%), Positives = 298/417 (71%), Gaps = 9/417 (2%)

Query: 9   STARSASK---WTYKDFTWALSLFGTAVGAGVLFLPIKAGAGGFWPLVLLALIAAPMTWF 65
           ST  S ++   WT +D TW LSLFGTAVGAG+LFLPI AG GGFWPLVL+A+I  PMT+ 
Sbjct: 14  STQESTTRHLPWTRQDTTWMLSLFGTAVGAGILFLPINAGMGGFWPLVLMAIIIGPMTYL 73

Query: 66  AHKSLARFVLSAKNPDADITDTVEEHFGKAGANLITFAYFFAIYPIVLIYGVGITNTVDS 125
           AH+ L+RFV S+  P +DIT  VEEHFG      IT  YF AIYPIVLIYGVGITNTVDS
Sbjct: 74  AHRGLSRFVCSSSIPGSDITQVVEEHFGIGAGKAITLLYFLAIYPIVLIYGVGITNTVDS 133

Query: 126 FLVNQIGMESIPRWLLSGALITAMTAGVVFGKELMLKATSAMVYPLVFILLALSFYLIPD 185
           F+VNQ+GM S PR+LLSG LI  M A +V G++ MLK T  +VYPLV IL  +S YLIP+
Sbjct: 134 FIVNQLGMASPPRFLLSGVLIFGMMAVMVAGEQFMLKVTQLLVYPLVGILAFMSIYLIPE 193

Query: 186 WNTSMMEVAPDWSAMPAIVWLAIPIIVFSFNHSPIISQFSKEQRQQFGDKAVQKTDMITG 245
           W    ++V PD  A    VWL IP++VF+FNHSP ISQFS   ++  G  A +K D+I  
Sbjct: 194 WKMDALQVVPDTGAFLGTVWLTIPVLVFAFNHSPAISQFSVSLKRDHGVNAARKADVILR 253

Query: 246 GAAMMLMGFVMFFVFSVVLSLSPAELAMAKEQNISVLSYLANEHASPIISYLGPIVAFAA 305
             +MML+GFVM FVFS VLSLSP +LA AK +N+ +LSYLAN H S  +SY GP +AF A
Sbjct: 254 NTSMMLVGFVMLFVFSCVLSLSPEQLAEAKAKNLPILSYLANVHDSGFVSYFGPFIAFVA 313

Query: 306 ITSSYFGHFLGAHEGLVGLVKSR---SNMQVS--KIEKISLGFIVITTWIVAIVNPSILG 360
           I SS+FGH++GA EG+ G++  +   SN Q+S  K+ K  L F+  T W VAI NPSILG
Sbjct: 314 IVSSFFGHYMGATEGMKGIIVKQLRSSNKQISENKLNKFILVFMFATIWAVAIKNPSILG 373

Query: 361 MIETMGAPMIAAILFLLPVFAMHKVPAMAKFKTSAPVQIFTVICGLAAISSVIYGAL 417
           MIE +G P+IAAIL+L+P++A++KVPA+  ++      +F +I GL A++++++G L
Sbjct: 374 MIEALGGPIIAAILYLMPMYAVYKVPALKAYRNRIS-NVFVIIAGLLAMTAILFGLL 429