Pairwise Alignments

Query, 453 a.a., L-serine ammonia-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., L-serine ammonia-lyase (RefSeq) from Shewanella amazonensis SB2B

 Score =  501 bits (1291), Expect = e-146
 Identities = 250/457 (54%), Positives = 332/457 (72%), Gaps = 6/457 (1%)

Query: 1   MISVFDIYKIGVGPSSSHTVGPMKAGKEFIDELRSMGKLRDVTKITVDVYGSLSLTGKGH 60
           MISVFDI+KIG+GPSSSHTVGPMKAGKEF+  + SMG L  V ++  +++GSL  TGKGH
Sbjct: 1   MISVFDIFKIGIGPSSSHTVGPMKAGKEFVARVESMGLLAQVDELRAELFGSLGQTGKGH 60

Query: 61  HTDIAIIMGLAGNTPEKVDIDSIPSFIARVEETERLPVGMHCHTVSFPREGGMNFHRTN- 119
            T  A+I+GL G  PE VD D+I   +A+V   E L +     TV F RE G+ +HR   
Sbjct: 61  GTGKAVILGLMGEDPETVDTDAIDGILAQVSSQETLTLAQG-KTVKFTREDGIIYHRRKT 119

Query: 120 LPLHENGMQIHAWINDEKIFSKTYYSIGGGFIVDEEHFGKENES----LIQVPYAFRSAE 175
           LP H N M ++A+   E ++ +TYYS+GGGF++DE+   ++N S    +   PY F SA+
Sbjct: 120 LPAHANAMTLYAFAGGECLYQRTYYSVGGGFVLDEDQIERKNPSPATPIKAAPYDFNSAQ 179

Query: 176 ELLNQCKESGLSISTLVMANEKAMHSDEEVRTYFANIWRTMRECMERGMNTEGILPGPLR 235
           +LL  C ++GLSIS+L+M NE  + S+++V+    +IW+TM+ C+E+G   EG+LPG L+
Sbjct: 180 QLLEMCTDNGLSISSLMMQNELTLASEDDVKARLWHIWQTMKTCIEKGYKKEGMLPGGLK 239

Query: 236 VPRRAAALRQQLLTSEKTTNDPMAVVDWVNMYAFAVNEENAAGGRVVTAPTNGACGIIPA 295
           + RRA  L ++L    +   DP+  +DWV+++A +VNE+NAAG RVVTAPTNGA GIIPA
Sbjct: 240 LRRRAPGLYRRLQAEGRNNVDPLNAMDWVDLFALSVNEQNAAGDRVVTAPTNGAAGIIPA 299

Query: 296 VLAYYDKFIQTVTEKDYIRYFAASGAIGGLYKRNASISGAEVGCQGEVGVACSMAAAGLA 355
           VL Y+D F+Q V      RY   + AIG LYK+NASISGAEVGCQGEVGVACSMAAA L 
Sbjct: 300 VLCYFDTFVQQVDVDICARYLLTAAAIGILYKKNASISGAEVGCQGEVGVACSMAAAALT 359

Query: 356 ELLGGSPEQVCMAAEIAMEHNLGLTCDPVAGQVQVPCIERNGIAAVKAINSTRMALRRSS 415
           E++GG+ E V  AAEI MEHNLGLTCDPV G VQVPCIERN + AVKAIN++R+ALR   
Sbjct: 360 EIMGGTVEHVENAAEIGMEHNLGLTCDPVGGLVQVPCIERNAMGAVKAINASRLALRGDG 419

Query: 416 APRVSLDKVIETMLETGKDMNAKYRETSQGGLAIKVI 452
             +VSLDKVI+TM++TG+DM +KY+ET++GGLA+ ++
Sbjct: 420 NHKVSLDKVIKTMMDTGRDMRSKYKETAKGGLAVNIV 456