Pairwise Alignments

Query, 453 a.a., L-serine ammonia-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., L-serine dehydratase 1 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  506 bits (1304), Expect = e-148
 Identities = 255/457 (55%), Positives = 329/457 (71%), Gaps = 6/457 (1%)

Query: 1   MISVFDIYKIGVGPSSSHTVGPMKAGKEFIDELRSMGKLRDVTKITVDVYGSLSLTGKGH 60
           MISVFD++KIG+GPSSSHTVGPMKAGK F+  L   G++  + ++  +++GSL  TGKGH
Sbjct: 1   MISVFDMFKIGIGPSSSHTVGPMKAGKIFMQHLADSGQIGQIDELRAELFGSLGQTGKGH 60

Query: 61  HTDIAIIMGLAGNTPEKVDIDSIPSFIARVEETERLPVGMHCHTVSFPREGGMNFHRT-N 119
            T  A+I+GL G  PE VD DSI   +  V ++E L +      V F RE G+ +HR  +
Sbjct: 61  GTGKAVILGLMGEDPETVDTDSIDGILEHVSKSETLTISCG-KVVKFTREDGITYHRRKS 119

Query: 120 LPLHENGMQIHAWINDEKIFSKTYYSIGGGFIVDEEHFGKENES----LIQVPYAFRSAE 175
           LP H N M ++A+   E IF +TYYS+GGGFI+DE+   + N S    +   PY F S+ 
Sbjct: 120 LPAHANAMTLYAYSKGECIFERTYYSVGGGFILDEDEINQRNASPASQIESAPYDFNSSA 179

Query: 176 ELLNQCKESGLSISTLVMANEKAMHSDEEVRTYFANIWRTMRECMERGMNTEGILPGPLR 235
           +LL  C E GLSIS+L+MANE ++ S+EEV+    NIW+TM+ C+ERG   EGILPG L+
Sbjct: 180 QLLELCTEHGLSISSLMMANELSLASEEEVKAKLWNIWQTMKTCIERGYQKEGILPGGLK 239

Query: 236 VPRRAAALRQQLLTSEKTTNDPMAVVDWVNMYAFAVNEENAAGGRVVTAPTNGACGIIPA 295
           + RRA AL ++L    +   DP+  +DWV+++A +VNE+NAAG RVVTAPTNGA GIIPA
Sbjct: 240 LRRRAPALYRRLKAEGRNNVDPLTAMDWVDLFALSVNEQNAAGDRVVTAPTNGAAGIIPA 299

Query: 296 VLAYYDKFIQTVTEKDYIRYFAASGAIGGLYKRNASISGAEVGCQGEVGVACSMAAAGLA 355
           VL YYD F+Q V      RY   + AIG LYK+NASISGAEVGCQGEVGVACSMAA  L 
Sbjct: 300 VLCYYDTFVQEVDIDVCARYLLTAAAIGILYKKNASISGAEVGCQGEVGVACSMAAGALT 359

Query: 356 ELLGGSPEQVCMAAEIAMEHNLGLTCDPVAGQVQVPCIERNGIAAVKAINSTRMALRRSS 415
           E++GG+ E V  AAEI MEHNLGLTCDPV G VQVPCIERN + A+KAIN++RMALR   
Sbjct: 360 EIMGGTVEHVENAAEIGMEHNLGLTCDPVGGLVQVPCIERNAMGAIKAINASRMALRGDG 419

Query: 416 APRVSLDKVIETMLETGKDMNAKYRETSQGGLAIKVI 452
             +VSLDKVI+TM++TGKDM +KY+ET++GGLA+ ++
Sbjct: 420 NHKVSLDKVIKTMMDTGKDMRSKYKETAKGGLAVNIV 456