Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  170 bits (431), Expect = 1e-46
 Identities = 115/358 (32%), Positives = 181/358 (50%), Gaps = 8/358 (2%)

Query: 179 TLIGVG--IMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSK-DLSHRLENDRKD 235
           +++G+   ++ VIA+ G +L    +R     PL      + +++  + DL+ RL    +D
Sbjct: 207 SIVGIAAVVLLVIAVVGLLLANAILR-----PLHLMKDNLDDIAAGEGDLTRRLTITSQD 261

Query: 236 ELGQLAVSINSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQT 295
           ELGQLA S N  +D +   ++Q+ D +  L     +++  AQ ++QA   Q+ ET +V T
Sbjct: 262 ELGQLAGSFNRFVDKIHGLVRQITDMTSQLTGLVTQVSEQAQRSEQAMERQRHETDQVAT 321

Query: 296 NITDMQGKQQQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVE 355
            I +M    Q+V  + + A+     T    Q + +    + + I  LV DI +    +  
Sbjct: 322 AINEMSSAAQEVARSAQGAAVAAQQTDEEGQSAKRVVAGSIQQIHALVNDIRSSGVSLDS 381

Query: 356 LNNQTGQVSSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEA 415
           L      + S+LGVI+ IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR LASRT ++
Sbjct: 382 LQQDVASIVSVLGVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQS 441

Query: 416 TGNIENIIAGFQRDSQASLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQVLSHAMGI 475
           T  I+ +I   Q  + A++ ++          S    E  A++  +   +  + S    I
Sbjct: 442 TQEIQGMIDRLQSGTHAAVEAMRRSSEAGDGTSERANEAGASLDTMAQLIGTINSMNAQI 501

Query: 476 QEQTKRTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLNQFTL 533
               +  T V+ EI   V  I    ++ +       + S  L  L Q+L  L+ QF +
Sbjct: 502 ASAAEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQTSRSLADLGQRLGKLVGQFRI 559