Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  172 bits (435), Expect = 5e-47
 Identities = 118/376 (31%), Positives = 197/376 (52%), Gaps = 19/376 (5%)

Query: 164 LEFNLNHLTQMVNHRTLIGVGIMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSK 223
           L+ +L+H  Q      + G+ I+ ++     +L ++ +   I  PL++  A + ++++ +
Sbjct: 346 LQKDLDHQRQA----DIFGMAIVGLVIAGIGLLVIWLVGHGIARPLKQMVAMLDDIAQGE 401

Query: 224 -DLSHRLENDRKDELGQLAVSINSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQA 282
            DL+ RL +DR DELG +A   N+ +  +   + QV  +  S++DS++   ++A  T+Q 
Sbjct: 402 GDLTRRLVSDRADELGAIARGFNTFLSKLQGMITQVVTSVQSVSDSSEHTADIAIRTNQG 461

Query: 283 ANNQQKETAEVQTNITDMQGKQQQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNL 342
            + Q  E  +V T + +M    Q V     +A++  +H      Q  +     S  I  L
Sbjct: 462 VHKQMSEIDQVATAVHEMTATAQDVARNATQAAQAASHADQAASQGMQIVRDTSTSIGAL 521

Query: 343 VGDIEAVKQRIVELNNQTGQVSSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVA 402
             +I      +  L   +  +++IL  I+GIAEQTNLLALNAAIEAARAGEQGRGFAVVA
Sbjct: 522 AVEIGKAVGVVQTLAKDSENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVA 581

Query: 403 DEVRHLASRTTEATGNIENIIAGFQ-------RDSQASLSSVDTVCSHAHQRSSEVEELS 455
           DEVR+LA +T +AT  I+ +I   Q       R  + S +  D    HA + +  +E ++
Sbjct: 582 DEVRNLAQKTQQATEEIQTMIQQLQQGTRDVVRVMEDSQTRTDESVQHAAKAAQALETIT 641

Query: 456 AAMTRVVSEMQQVLSHAMGIQEQTKRTTEVSHEIQNKVDVITHHANNTSQSASETREISI 515
            A++ V+++M   ++ A       +  + V+ +I   V  I   AN  +  A E+   S 
Sbjct: 642 QAVS-VINDMNTQIASA------AEEQSAVADDINRNVINIGQVANEVASGADESSAASA 694

Query: 516 DLEHLSQQLESLLNQF 531
            L  L++Q   L+NQF
Sbjct: 695 GLTKLAEQQRRLINQF 710