Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  160 bits (406), Expect = 1e-43
 Identities = 133/471 (28%), Positives = 226/471 (47%), Gaps = 29/471 (6%)

Query: 81  EQVRVIRAPSLNKIYGPGSTDQQPKDEIDQRALQG-ETI---IEPYQADWGKGIVVALPM 136
           E V ++R         P S  +Q      + AL+  ET+     P  AD  K +  AL  
Sbjct: 177 EDVALVRYEVRGYTGNPNSATEQAATRQLENALKSIETLNGAFGPSYADTIKQLETALIA 236

Query: 137 --KSSENYRGTNCVACHIAPE----GEVLGVIRLEFNLNHLTQMVNHRT---LIGVGIMS 187
             +S +N+  +N        +    GE +  +  E   + L  + +      ++ +   +
Sbjct: 237 YRRSVQNFTASNQAIGKAVQDTIDLGETITRLTDEMYASQLVSLGDESAQSRILQLSCTA 296

Query: 188 VIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSKDLSHRLENDRKDELGQLAVSINSL 247
           +  L G +  +   R+I   PLQ T A +  ++   DL+      R DELG L   I  +
Sbjct: 297 LAMLLGILAAMIITRQI-TRPLQDTLAVVDRIAAG-DLTQGTVVTRGDELGVLQQGIQRM 354

Query: 248 MDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNITDMQGKQQQV 307
             T+ D +  ++D    +A +A++L+ V + T    N+Q+ ET +V T + +M     +V
Sbjct: 355 GTTLRDLIGGIRDGVTQIASAAEELSAVTEQTSAGVNSQKTETDQVATAMQEMSATVHEV 414

Query: 308 EFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELNNQTGQVSSIL 367
               E+A  + +   +  +   +    A   I+ L  ++      + EL  ++ ++  I+
Sbjct: 415 ARNAEQACTVASEADAQARIGDQVVAQAIVQIERLASEVGRSVDAMDELEQESARIGKIM 474

Query: 368 GVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATGNIENIIAGFQ 427
            VI+ +AEQTNLLALNAAIEAARAG+ GRGFAVVADEVR LA RT  +T  IE+++AG Q
Sbjct: 475 DVIRAVAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRGLAQRTQHSTEEIESLVAGLQ 534

Query: 428 RDSQA-------SLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQVLSHAMGIQEQTK 480
             ++        S    D+    A +    +  ++ A++ + +  QQ+ + A+   +Q+ 
Sbjct: 535 NGTRQVSSIMRNSRELTDSSVELAGKAGISLGNITQAVSGIQAMNQQIAAAAV---QQSS 591

Query: 481 RTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLNQF 531
              E+S  I N  DV    +  T+ ++ ET   SI+L  L  QL+ L++ F
Sbjct: 592 VAEEISRSILNVRDV----SEQTASASEETAASSIELARLGNQLQQLVSHF 638