Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  171 bits (432), Expect = 1e-46
 Identities = 112/353 (31%), Positives = 190/353 (53%), Gaps = 9/353 (2%)

Query: 185 IMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSKDLSHRLENDRKDELGQLAVSI 244
           + +++AL   +L  + + R I+LPL+ T A +  ++ S DLS   +  R+DELG L   I
Sbjct: 293 VSTLLALVLGVLAAWLITRQIILPLRTTMADVERIA-SGDLSETAQIQRRDELGVLQRGI 351

Query: 245 NSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNITDMQGKQ 304
             +  T+ + +  ++D    ++ +A++L+ V Q T    N+Q++ET +V T + +M    
Sbjct: 352 QQMGSTLRELIGGIRDGVSQISAAAEELSAVTQQTSAGVNSQKEETDQVATAMHEMSATV 411

Query: 305 QQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELNNQTGQVS 364
           Q+V    E+A+       S  ++  +        I+ +   +    + +  L  ++ ++ 
Sbjct: 412 QEVARNAEQAALAATEADSEAREGDRVVTEVVTQIERMASAVVRSTEAMTALQEESDKIG 471

Query: 365 SILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATGNIENIIA 424
           S++ VI+ +AEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT ++T  IE ++A
Sbjct: 472 SVMNVIRAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEGLVA 531

Query: 425 GFQRDSQASLSSVDT---VCSHAHQRSSEVEELSAAMTRVVSEMQQVLSH-AMGIQEQTK 480
             Q  +Q   S + T   +     + +        ++TR VS +Q +    A   +EQ+ 
Sbjct: 532 ALQNGTQQVASIMHTSRDLTDSGVELARRAGASLGSITRTVSNIQAMNQQIAAAAEEQSA 591

Query: 481 RTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLNQFTL 533
              E+S  + N  DV    +  T+ ++ ET   S +L  L  QL+ ++++F L
Sbjct: 592 VAEEISRSVVNVRDV----SEQTAAASEETAASSTELARLGGQLQMMVSRFRL 640