Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  168 bits (425), Expect = 6e-46
 Identities = 109/357 (30%), Positives = 188/357 (52%), Gaps = 8/357 (2%)

Query: 179 TLIGVGIMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSK-DLSHRLENDRKDEL 237
           T +G+ I+S++ +    L  + + R +++ ++   A +  +++   DL+ R+  +  DE+
Sbjct: 186 TRLGI-ILSLVLVILVSLGAWLVIRSVMVNIRGVIASLQSIARGDGDLTQRVNVESNDEI 244

Query: 238 GQLAVSINSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNI 297
           G +    NS +D +  +++Q+ D +  L   +K+L  + Q +++ A +QQ  T  +  +I
Sbjct: 245 GAMIELFNSFLDKLQSTIRQIIDAATPLGQVSKELYKLTQGSEENAKSQQHHTDSITRDI 304

Query: 298 TDMQGKQQQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELN 357
             M G  Q+V   +++AS   N        + +   + S  I +L   +    + + +L 
Sbjct: 305 LTMTGSIQEVAQRSQQASDEANSAARQAATAREHVGSLSTGISDLGDSVMGAVKAMEQLE 364

Query: 358 NQTGQVSSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATG 417
            +T +V S+L VI+ IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +T  +T 
Sbjct: 365 EETQEVGSVLTVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTAASTA 424

Query: 418 NIENIIAGFQRDSQASLSSVDTVCSHAH---QRSSEVEELSAAMTRVVSEMQQVLSHAMG 474
            I+ II   Q  +   L+ + +    +    QRS E  +L   + R V+++ ++ +   G
Sbjct: 425 EIQQIIQRLQNSANTVLNVMTSNGEKSRASIQRSIEATQLLETIARTVNQIDELNA---G 481

Query: 475 IQEQTKRTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLNQF 531
           I + T+    +S  IQ +  V+   A  T+  A  T  +   L      L +   QF
Sbjct: 482 IAQFTQEQIGLSSSIQQETQVLQQDAQATANGAEATARLGEQLVSTGDHLRAATGQF 538