Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 650 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  176 bits (447), Expect = 2e-48
 Identities = 111/365 (30%), Positives = 189/365 (51%), Gaps = 1/365 (0%)

Query: 167 NLNHLTQMVNHRTLIGVGIMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSKDLS 226
           N ++  Q     + + +G++  +A+F  +L    + R+IV PL+ T      V+   DL+
Sbjct: 285 NASNAMQQQQRSSYLLLGVIGALAIFVGLLAATVISRMIVGPLRSTVQQAQRVANG-DLT 343

Query: 227 HRLENDRKDELGQLAVSINSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQ 286
           H   + R+DE+GQL  +++ +  ++ + + ++      +A +A +L+ V   T      Q
Sbjct: 344 HSEASARRDEVGQLQNAMHGMTQSLRNLIGRIGGGVSQIAAAADQLSAVTAQTSAGVQTQ 403

Query: 287 QKETAEVQTNITDMQGKQQQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDI 346
           + ET +V T + +M    Q+V    E+AS          +Q  +    A   I NL  ++
Sbjct: 404 RVETEQVATAMHEMAATVQEVARNAEQASIAARQADQQARQGDRVVQDAVGQIGNLASEV 463

Query: 347 EAVKQRIVELNNQTGQVSSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 406
           +     I  L+ ++G++ S+L VI+ +AEQTNLLALNAAIEAARAGEQGRGFAVVADEVR
Sbjct: 464 DQSAHAIEALHAESGRIGSVLEVIRAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 523

Query: 407 HLASRTTEATGNIENIIAGFQRDSQASLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQ 466
            LA RT ++T  IE +IA  QR +Q ++  + +  S   +      E   A+ R+   + 
Sbjct: 524 ALARRTHDSTEEIEGLIANLQRVAQQAVEQMQSSRSLTQRTVDLANEAGVALGRITESVS 583

Query: 467 QVLSHAMGIQEQTKRTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLES 526
            +      I    ++ + V+  I   V  +    + ++ +  +T   S +L  L  +L+ 
Sbjct: 584 TIEQMNQQIAAAAEQQSAVAENISESVTRVRDIGDQSASATEQTAGASAELARLGVELQG 643

Query: 527 LLNQF 531
           L+ QF
Sbjct: 644 LVRQF 648