Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  325 bits (833), Expect = 3e-93
 Identities = 185/530 (34%), Positives = 299/530 (56%)

Query: 4   SILSKLLLTLITVFALVLAGSTSYQYWQQKDLIHSVLSEQLHDKASNYFDSLNMMMLTGT 63
           S+ +K+ L L+ V   +++ S       +K L+  V+ +Q  D A +YFDS+N MMLTGT
Sbjct: 10  SVQTKINLALVLVLVAIMSASLFIAASTEKRLVLQVVEQQTKDAADSYFDSINTMMLTGT 69

Query: 64  MAQKETLRQKALAQDGIEQVRVIRAPSLNKIYGPGSTDQQPKDEIDQRALQGETIIEPYQ 123
           MAQ+E LR+K LA+ G+   R+IR+  + K++GPG   Q P D +D+RAL GE IIE  +
Sbjct: 70  MAQREVLRKKILARPGVIDARIIRSDEVTKVFGPGFDHQSPVDALDRRALSGEGIIEVNK 129

Query: 124 ADWGKGIVVALPMKSSENYRGTNCVACHIAPEGEVLGVIRLEFNLNHLTQMVNHRTLIGV 183
              G+ + V  P+ +  +YRGTNC+ CH   E  V+G +R+ ++L  L Q V+   +I  
Sbjct: 130 QSGGRVLTVINPILAHADYRGTNCLTCHQVAENAVMGAVRISYDLKALDQEVDRNIMISG 189

Query: 184 GIMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSKDLSHRLENDRKDELGQLAVS 243
            I  ++ + G ++    +R +I+  +      M  +++ +DLS  +    KDE+G +  +
Sbjct: 190 AIQLLLLVIGVVVMCMTVRHVIIRRINAMRHTMNAMAEDEDLSRSVAIGAKDEIGAMGDA 249

Query: 244 INSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNITDMQGK 303
            N ++     SL+ V   +H L D ++++++VA+ T  A N Q+ ET  V + + +M   
Sbjct: 250 FNRMIGKFRHSLEAVAGVTHQLTDVSERVSHVAEKTLAAVNEQRSETDMVASAMNEMSAT 309

Query: 304 QQQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELNNQTGQV 363
            Q+V     + +       +  +   K A  A + I+ L+ +IE   Q I  + + +  +
Sbjct: 310 VQEVARNANQTATASAGADTESKAGVKVATEALDGIEVLIAEIEKAAQVIQRVESDSASI 369

Query: 364 SSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATGNIENII 423
             +LGVI GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LASRT ++T  I+ +I
Sbjct: 370 DMVLGVINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQKSTEEIQAMI 429

Query: 424 AGFQRDSQASLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQVLSHAMGIQEQTKRTT 483
              Q   + ++ ++      A   S  VE+ + ++  + +E+  +      I    ++ +
Sbjct: 430 EQLQSGVRNAVQAMKEAQLRARSGSQCVEKAAQSLGLIATEVGTINEMNTQIATAAEQQS 489

Query: 484 EVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLNQFTL 533
            V+ EI   +  I+  A+ TS  A++T EIS +L  L+ +L  L+ QF L
Sbjct: 490 AVAEEINRNISTISRIADTTSTDATQTSEISDELVRLATELNRLVGQFKL 539