Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 584 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  175 bits (443), Expect = 5e-48
 Identities = 120/370 (32%), Positives = 197/370 (53%), Gaps = 30/370 (8%)

Query: 180 LIGVGIMSVIALFGFMLTL-FFMRRIIVLPLQKTSAFMCEVSKSK-DLSHRLENDRKDEL 237
           L+ + ++S  AL   M  L  FM   ++ PL      + ++++   DL+ RL    +DEL
Sbjct: 229 LVTIMLVSAFALLVLMALLAIFMSNALLSPLLLIKRNLDDMAQGDGDLTQRLPITSQDEL 288

Query: 238 GQLAVSINSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNI 297
           G+LA+S N  ++ +   +QQV  T+  L+     + + AQ ++QA  +Q+ ET +V T I
Sbjct: 289 GELAMSFNRFVEKIHSLVQQVAGTTTQLSGLVGAVASQAQRSEQAMADQRSETDQVATAI 348

Query: 298 TDMQGKQQQVEFATEEASKLVNHTTS-------IVQQSAKQAHAASEDIKNLVGDIEAVK 350
            +M     +V  + + A++    T         +V QS +Q H        LVG++    
Sbjct: 349 NEMSAAAHEVAMSAQRAAEAARETDQQGVAAKQVVDQSIRQIH-------ELVGELRGSG 401

Query: 351 QRIVELNNQTGQVSSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLAS 410
           + +  L      +  +L VI+ IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR LAS
Sbjct: 402 ESLEGLQQDVKGIVGVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAS 461

Query: 411 RTTEATGNIENIIAGFQRDSQASLSSV-------DTVCSHAHQRSSEVEELSAAMTRVVS 463
           RT ++TG I+ +I   Q  +  ++S++       ++    A+Q    ++ +SA +  + S
Sbjct: 462 RTQQSTGEIQGMIDRLQSATSNTVSTMLRAGEKGESTRDQANQAGESLDAISALIGTINS 521

Query: 464 EMQQVLSHAMGIQEQTKRTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQ 523
              Q+   A   +EQT    E++  + +  D +   A++ +Q A  +RE    L  L+++
Sbjct: 522 MNAQI---AAAAEEQTAVAEEINRSVHHIADAVDGVASDAAQGAQTSRE----LNGLAER 574

Query: 524 LESLLNQFTL 533
           L+ L+ QF +
Sbjct: 575 LQKLVGQFRI 584