Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  175 bits (443), Expect = 5e-48
 Identities = 117/369 (31%), Positives = 197/369 (53%), Gaps = 32/369 (8%)

Query: 180 LIGVGIMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSK-DLSHRLENDRKDELG 238
           ++G  ++ +I + G  +    M   I+ PL +    + ++++   DL+HRL    +DELG
Sbjct: 210 MLGSALLLLILMAGLAV---LMSNAILRPLLQIKQNLDDMAQGDGDLTHRLPITSRDELG 266

Query: 239 QLAVSINSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNIT 298
           +L+ S N  ++ +   ++QV  T+  L+     + + AQ ++QA  +Q+ ET +V T I 
Sbjct: 267 ELSTSFNRFVEKIHALVRQVAGTTTQLSGLVGAVASQAQRSEQAMADQRSETDQVATAIN 326

Query: 299 DMQGKQQQVEFATEEASKLVNHTTS-------IVQQSAKQAHAASEDIKNLVGDIEAVKQ 351
           +M     +V  + + A++    T         +V QS +Q H        LVG++    +
Sbjct: 327 EMSAAAHEVAMSAQRAAEAARETDQQGVAAKQVVDQSIRQIH-------ELVGELRGSGE 379

Query: 352 RIVELNNQTGQVSSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASR 411
            +  L      +  +L VI+ IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR LASR
Sbjct: 380 SLEGLQQDVKGIVGVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASR 439

Query: 412 TTEATGNIENIIAGFQRDSQASLSSV-------DTVCSHAHQRSSEVEELSAAMTRVVSE 464
           T ++TG I+ +I   Q  +  ++ ++       ++  +HA+Q    ++ +SA +  + S 
Sbjct: 440 TQQSTGEIQGMIDRLQNATSHTVGTMLRAGEKGESTRNHANQAGESLDAISALIGTINSM 499

Query: 465 MQQVLSHAMGIQEQTKRTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQL 524
             Q+   A   +EQT    E++  + +  D +   A++ +Q A   RE    L  L++QL
Sbjct: 500 NAQI---AAAAEEQTAVAEEINRSVHHIADAVDGVASDAAQGAQTARE----LNGLAEQL 552

Query: 525 ESLLNQFTL 533
           + L+ QF +
Sbjct: 553 QRLVGQFRI 561