Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  174 bits (442), Expect = 6e-48
 Identities = 108/344 (31%), Positives = 183/344 (53%), Gaps = 1/344 (0%)

Query: 181 IGVGIMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSKDLSHRLENDRKDELGQL 240
           +G  IM + ++   + +L+ + R I+ P++     +  +S+ K  + R++  R DELG+L
Sbjct: 189 LGPLIMILASVVVALFSLWLVNRRIIEPIRSLIEHIARLSQGK-FADRVDASRADELGRL 247

Query: 241 AVSINSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNITDM 300
           AV+ N L D ++D+  ++Q ++ +L  ++ +L+ +A++       Q   T +V T + +M
Sbjct: 248 AVAANVLRDFLADTFTRLQQSTSNLDSASGELSAIARLMADGTREQFSRTDQVATAMHEM 307

Query: 301 QGKQQQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELNNQT 360
               Q+V     EA++  +      QQ      A    I ++ G+I +  + I  L   +
Sbjct: 308 SATAQEVSRHAAEAAQAADAADHSAQQGEAVMRATIATITDVSGEIASTAEVIRRLEGDS 367

Query: 361 GQVSSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATGNIE 420
           G++  +L VI+GIA+QTNLLALNAAIEAARAG+ GRGFAVVADEVR LA RT E+T  I 
Sbjct: 368 GRIGKVLEVIRGIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRTLAQRTAESTAEIH 427

Query: 421 NIIAGFQRDSQASLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQVLSHAMGIQEQTK 480
            II   Q  +  ++ ++++  + + Q   +V E    + R+   ++ +      I    +
Sbjct: 428 QIIDTVQTGASNAVRAIESGQARSEQGVGQVTEAGLMLQRITEAVEAIRDMNRQIATAAE 487

Query: 481 RTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQL 524
             T V+ +I   +  IT  A    Q+   T   S +L  LS QL
Sbjct: 488 EQTAVAEDISRNITEITSIATINQQNVERTETASQNLHGLSAQL 531



 Score = 30.4 bits (67), Expect = 2e-04
 Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 21/150 (14%)

Query: 225 LSHRLENDRKDELGQ----LAVSINSLMDTVSDS---LQQVQDTSHSLADSAKKLTNVAQ 277
           L+  +E  R  + G+    +A  + +L    ++S   + Q+ DT  + A +A +     Q
Sbjct: 389 LNAAIEAARAGDAGRGFAVVADEVRTLAQRTAESTAEIHQIIDTVQTGASNAVRAIESGQ 448

Query: 278 VTDQAANNQQKETAEVQTNITD----MQGKQQQVEFATEEA-------SKLVNHTTSIV- 325
              +    Q  E   +   IT+    ++   +Q+  A EE        S+ +   TSI  
Sbjct: 449 ARSEQGVGQVTEAGLMLQRITEAVEAIRDMNRQIATAAEEQTAVAEDISRNITEITSIAT 508

Query: 326 --QQSAKQAHAASEDIKNLVGDIEAVKQRI 353
             QQ+ ++   AS+++  L   +  V QR+
Sbjct: 509 INQQNVERTETASQNLHGLSAQLTEVTQRL 538