Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  159 bits (401), Expect = 3e-43
 Identities = 106/352 (30%), Positives = 186/352 (52%), Gaps = 24/352 (6%)

Query: 195 MLTLFF---MRRIIVLPLQKTSAFMCEVSKSKDLSHRLENDRKDELGQLAVSINSLMDTV 251
           +LTL F   + + I  P+  T+    E     +L+  +  D  DE G+L +++ ++ D +
Sbjct: 201 LLTLVFAWMLIKSITTPIA-TALLAAETIAQGNLTRPISIDGTDEAGRLLLAMKTMQDKL 259

Query: 252 SDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNITDMQGKQQQVEFAT 311
            D+LQ +  ++  LA +A++L     VTD++A    ++  E++   T +     Q+  A 
Sbjct: 260 RDTLQGISGSATQLASAAEELN---AVTDESARGLVQQNDEIEQAATAVN----QMTSAV 312

Query: 312 EEASKLVNHTTSIVQQSAKQAHAASED----------IKNLVGDIEAVKQRIVELNNQTG 361
           EE ++   + TS  Q S   A +A +           I+ + GD++   + I+ L N++ 
Sbjct: 313 EEVAR---NATSTSQASRSAATSAGDGRDLVQETVSAIERMSGDVQGTAELIISLANESR 369

Query: 362 QVSSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATGNIEN 421
            +  +L VI+G+A+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT ++T  IE 
Sbjct: 370 DIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIER 429

Query: 422 IIAGFQRDSQASLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQVLSHAMGIQEQTKR 481
           +I+  Q  ++ ++SS+      A    +  +    A+  + S ++++    M I    + 
Sbjct: 430 MISSIQTGTEQAVSSMRNSTERAESTLNIAKGAGQALNTINSAVEEINERNMVIASAAEE 489

Query: 482 TTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLNQFTL 533
             +V+ E+   +  I   +  ++  A++T   S +L  L+  L  ++ +F L
Sbjct: 490 QAQVAREVDRNLVNIRDLSAQSTNGANQTSAASTELSRLAIDLNGMVARFAL 541