Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  171 bits (433), Expect = 7e-47
 Identities = 105/359 (29%), Positives = 184/359 (51%), Gaps = 18/359 (5%)

Query: 183 VGIMSVIALFGFMLTLFF---MRRIIVLPLQKTSAFMCEVSKSKDLSHRLENDRKDELGQ 239
           V ++ ++ +  F+LT+     + R IV P+   S  + E   + DL+ +L     DE  +
Sbjct: 189 VNVLMIVLIAAFLLTVVLAIALTRSIVDPIS-ASLKLAEDIAAGDLTRQLSVSGSDEASR 247

Query: 240 LAVSINSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNITD 299
           L  ++N++   +  ++ ++   S  L+ +A ++T++ +  D+    Q  E  +  T + +
Sbjct: 248 LMTALNTMSGNLRTTIHEISGASAQLSTAAVEMTSITESADRTLQQQNSEIEQAATAVNE 307

Query: 300 MQGKQQQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDI-------KNLVGDIEAVKQR 352
           M         A EE ++    T+   QQS+  A   ++ +       +NL G +E    +
Sbjct: 308 MSA-------AVEEVARNATSTSQAAQQSSLSADLGNQRVNETLTAMQNLTGLVEGSSAQ 360

Query: 353 IVELNNQTGQVSSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRT 412
           +  L  Q   +S +LGVI+GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RT
Sbjct: 361 VTALAGQAQDISKVLGVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRT 420

Query: 413 TEATGNIENIIAGFQRDSQASLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQVLSHA 472
             +T  +E +I+  Q  S A++ S+       H      E+   ++ ++   + ++ +  
Sbjct: 421 QTSTQEVEQMISAIQAGSSATVESMHKSTQEVHVTRKTAEDAGESLRQITDSVLEINNRN 480

Query: 473 MGIQEQTKRTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLNQF 531
           + I   +++   V+ ++   +  I   A  +S+   +T   S +L  L+  L  L+ +F
Sbjct: 481 LQIAAASEQQAHVARDVDRSLVSIRDLAVQSSEGTRQTLIASTELSQLAVNLNDLVLRF 539