Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  160 bits (405), Expect = 1e-43
 Identities = 100/347 (28%), Positives = 182/347 (52%), Gaps = 1/347 (0%)

Query: 185 IMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSKDLSHRLENDRKDELGQLAVSI 244
           I  VIA    +    ++ R IV PLQ+      +V+   DL+H +E D +DE+ +L  ++
Sbjct: 194 IFVVIAALCTIGLALWLTRSIVGPLQRAVTAAEQVANG-DLTHTIEVDGEDEVTRLLRAL 252

Query: 245 NSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNITDMQGKQ 304
             +   + ++++ +  ++  LA +A +L +V + + +  N Q  E  +  T I +M    
Sbjct: 253 AMMQVNLREAMRHIGSSATQLASAATELNSVTEDSYRGLNQQNAEIDQAATAINEMTSAV 312

Query: 305 QQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELNNQTGQVS 364
           ++V       S   N +++       +     + I+ L  +++A    +  L NQ+  + 
Sbjct: 313 EEVARNAVSTSDASNQSSTSALAGQTRVIETVQSIQTLTDNVQATSTLVQNLANQSQDIG 372

Query: 365 SILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATGNIENIIA 424
            +L VI+ IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT ++T  I+++++
Sbjct: 373 KVLDVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRALAHRTQQSTLEIDSMVS 432

Query: 425 GFQRDSQASLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQVLSHAMGIQEQTKRTTE 484
             +  S  +L S++T  + A    +  +    +++ + S + Q+    + I    +   +
Sbjct: 433 AMRSGSAQALDSMNTSRARADSTLALAKGAGESLSEITSSINQISERNLVIASAAEEQAQ 492

Query: 485 VSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLNQF 531
           VS E+   +  I   +  ++Q A++    S +L  L+  L  ++++F
Sbjct: 493 VSREVDRNIVNIRDLSMQSTQGANQISASSHELSRLAADLNQVVSRF 539