Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 653 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  167 bits (422), Expect = 1e-45
 Identities = 104/351 (29%), Positives = 184/351 (52%), Gaps = 2/351 (0%)

Query: 181 IGVGIMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSKDLSHRLENDRKDELGQL 240
           + V I+ ++ +    L    +R I V  +      M     ++DL+ R     KDE G++
Sbjct: 302 VAVAIVVLMLIVVLWLASVIIRNIKVAVVDVNRTLMA--LSTRDLTARTRYIGKDEFGEI 359

Query: 241 AVSINSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNITDM 300
           + +++++   +S+ + ++   +  +A +A++ + VA  T+Q    Q++ T +V T I++M
Sbjct: 360 SRNLDNMAHQISEVISEIGSATAQVATAAEQSSAVALQTNQNVAQQRQGTDQVATAISEM 419

Query: 301 QGKQQQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELNNQT 360
               + V  +T +A+++     S   Q   +       I+ L    E   + I EL  ++
Sbjct: 420 SATVKDVARSTTDAAEMSQRVNSSTVQGKTEIDNTIGLIQELSVQAEETSRIIDELKGES 479

Query: 361 GQVSSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATGNIE 420
             +SS+L VI+G+A+QTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +T ++T +I+
Sbjct: 480 NSISSVLDVIRGVADQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAKKTQDSTVSIQ 539

Query: 421 NIIAGFQRDSQASLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQVLSHAMGIQEQTK 480
            +IA  Q  S+ + +S+      A + +S V      +  +   +  +    + +    +
Sbjct: 540 KMIANLQSGSERAAASMQETLGKAQEGASNVVRAGELLEEIAEGIATISDRNIQVASAAE 599

Query: 481 RTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLNQF 531
             + V+ EI   VD I       S  A +T   S +L  L++Q + L+ +F
Sbjct: 600 EQSLVAEEIHRNVDDINSLVIQVSAGAEQTAVTSRELARLAEQQQGLVGRF 650