Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  166 bits (421), Expect = 2e-45
 Identities = 111/354 (31%), Positives = 193/354 (54%), Gaps = 15/354 (4%)

Query: 187 SVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSKDLSHRLENDRKDELGQLAVSINS 246
           +++A+   ++    + R I  PL++T A +  ++ S DL+  L   R DELG L   I  
Sbjct: 295 TLLAIILGIIAAVIITRQITRPLRETLAVVDRIA-SGDLTQTLAVTRSDELGVLQQGIQR 353

Query: 247 LMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNITDMQGKQQQ 306
           +  T+ + +  ++D+   +A +A++L+ V + T    N+Q+ ET +V T + +M     +
Sbjct: 354 MGTTLRELIGGIRDSVVQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMHEMSATVAE 413

Query: 307 VEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELNNQTGQVSSI 366
           V    E+AS+  ++     +   K    A   I+ L  ++      + EL  ++ ++  +
Sbjct: 414 VARNAEQASQAASNADREARDGDKVVGEAIAQIERLANEVGRSVDAMTELEQESDKIGKV 473

Query: 367 LGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATGNIENIIA-- 424
           + VIK +AEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT ++T  IE ++A  
Sbjct: 474 MDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQQSTVEIETLVAAL 533

Query: 425 --GFQRDSQASLSSVDTVCSH---AHQRSSEVEELSAAMTRVVSEMQQVLSHAMGIQEQT 479
             G ++ S   L+S +   S    + Q  + +  ++  ++ + +  QQ+   A   +EQ+
Sbjct: 534 QSGTRQVSSIMLNSRELTVSSVTLSRQAGTSLGSITQTVSSIQAMNQQI---AAAAEEQS 590

Query: 480 KRTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLNQFTL 533
               E+S  I N  DV    +  T+ ++ ET   S++L  L  QL++++++F +
Sbjct: 591 AVAEEISRSIVNVRDV----SEQTASASEETAASSVELARLGGQLQTMVSRFRI 640