Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  165 bits (417), Expect = 6e-45
 Identities = 107/346 (30%), Positives = 176/346 (50%), Gaps = 1/346 (0%)

Query: 187 SVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSK-DLSHRLENDRKDELGQLAVSIN 245
           +++    F++   F+   +  P+   +    ++ + + DL  RL    +DEL QLA   N
Sbjct: 289 TLLIALAFVVLSGFVASSVSKPIAAVARMFRDIGEGEGDLRQRLPVQGEDELAQLASGFN 348

Query: 246 SLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNITDMQGKQQ 305
           S +  + DS+ +V  TS  L  SA  ++  AQ T + + +Q+  T +V T I +M     
Sbjct: 349 SFISKIQDSVIEVAQTSEQLGKSAIDVSRQAQQTLEDSQDQKDRTMQVVTAINEMGATVN 408

Query: 306 QVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELNNQTGQVSS 365
           ++     +A++             K    A + I  L  D+  V + I  L   T  + S
Sbjct: 409 EIAANAAQAAEAAKDADRASGSGQKVVTQARDTINQLSKDVSQVGEVIESLATHTKSIGS 468

Query: 366 ILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATGNIENIIAG 425
           IL VI+ I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR+LASRT  +T  ++ +I  
Sbjct: 469 ILDVIRAISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLASRTAASTDEVQVMIDK 528

Query: 426 FQRDSQASLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQVLSHAMGIQEQTKRTTEV 485
            Q +S  +++++    S + +  S V+E S  ++ +  ++  +    + +   T+  + V
Sbjct: 529 LQSESARAVNAMSQSRSRSQEGVSAVDEASNTLSGISDQIGLISDMNIQVAAATEEQSTV 588

Query: 486 SHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLNQF 531
             +I   V  I      T+ +A      S DL  L+ +L+ L+ +F
Sbjct: 589 VEDINRNVTEINDITQRTAATAQAAARASKDLNALATRLDQLVARF 634