Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  155 bits (393), Expect = 3e-42
 Identities = 110/340 (32%), Positives = 162/340 (47%), Gaps = 1/340 (0%)

Query: 195 MLTLFFMRRIIVLPLQKTSAFMCEVSKSK-DLSHRLENDRKDELGQLAVSINSLMDTVSD 253
           +L L  + R I  P+  T A    +++ + DL+ RLE   +DEL Q+A S N  +  +  
Sbjct: 209 ILILGVISRSISAPMADTIAAFENIARGEGDLTLRLEESGRDELKQVAASFNEFVAKIQA 268

Query: 254 SLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNITDMQGKQQQVEFATEE 313
            +  V  +     + A+ L +++        N Q ET  V T I +M     +V    + 
Sbjct: 269 LVNSVSASVTHSRELAEGLADISAQASMVTANMQAETQSVATAINEMSMASSEVASNAQL 328

Query: 314 ASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELNNQTGQVSSILGVIKGI 373
           A+            +      A   IK L  ++E        L   +G++  IL VI GI
Sbjct: 329 AADSAGSADGEADDTVAVVDGAVAKIKGLSNELEVTADEAQALQISSGKIGQILDVIVGI 388

Query: 374 AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATGNIENIIAGFQRDSQAS 433
           AEQTNLLALNAAIEAARAGE GRGFAVVADEVR LASRT E+T  I  II   +    + 
Sbjct: 389 AEQTNLLALNAAIEAARAGEAGRGFAVVADEVRTLASRTQESTQEINAIIEAIRASVDSV 448

Query: 434 LSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQVLSHAMGIQEQTKRTTEVSHEIQNKV 493
            +SV    + + Q   E  ++  A+  + S ++Q+    + I   T+  + V  E+   V
Sbjct: 449 NASVARAKAQSEQTVGETSQVVEALQTIKSSIRQISDMNIQIATATEEQSAVIAELNMNV 508

Query: 494 DVITHHANNTSQSASETREISIDLEHLSQQLESLLNQFTL 533
             I   +    Q + E    S  ++  S  LESL++ F L
Sbjct: 509 TRINDISLENQQKSEEIGSTSEQIKSGSADLESLISTFKL 548