Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  175 bits (443), Expect = 4e-48
 Identities = 120/384 (31%), Positives = 203/384 (52%), Gaps = 13/384 (3%)

Query: 154 PEGEVLG----VIRLEFNLNHLTQMVNHRTLIGVGIMSVIALFGFMLTLFFMRRIIVLPL 209
           P G +LG    +  +E  + H   ++   TLI + +M+ +         + + R IV PL
Sbjct: 159 PWGWILGSGILLQDIENTIWHEYVLMGGTTLILILLMAALG--------YIISRSIVQPL 210

Query: 210 QKTSAFMCEVSKSKDLSHRLENDRKDELGQLAVSINSLMDTVSDSLQQVQDTSHSLADSA 269
            + +  M ++  + +L+ +L    KDEL  LA +IN  M ++  +L +   ++ +++ +A
Sbjct: 211 DQVNNAM-QIIATGNLTPQLAVTGKDELAALAHNINQSMASIRTALAEANHSADNVSQAA 269

Query: 270 KKLTNVAQVTDQAANNQQKETAEVQTNITDMQGKQQQVEFATEEASKLVNHTTSIVQQSA 329
            ++ + A+ T+QA NNQ+ + A++ T + +M      V    E  +K     T       
Sbjct: 270 SRIASTAEETNQAVNNQRDQLAQLATAMNEMSATIADVANNAESTAKDTKEATREAGLGD 329

Query: 330 KQAHAASEDIKNLVGDIEAVKQRIVELNNQTGQVSSILGVIKGIAEQTNLLALNAAIEAA 389
           K  HA+ + I  L  ++E   Q++ +L  +  Q+S +  VI  I++QTNLLALNAAIEAA
Sbjct: 330 KDVHASVDGIHALAKEVEQATQQVNKLKEEIMQISEVTAVISAISDQTNLLALNAAIEAA 389

Query: 390 RAGEQGRGFAVVADEVRHLASRTTEATGNIENIIAGFQRDSQASLSSVDTVCSHAHQRSS 449
           RAGEQGRGFAVVADEVR LASRT ++T  I+N I+  Q+ + ++ +++DT    A +   
Sbjct: 390 RAGEQGRGFAVVADEVRQLASRTRQSTEEIQNTISLLQQRAVSAANAMDTSRDLAEKSVD 449

Query: 450 EVEELSAAMTRVVSEMQQVLSHAMGIQEQTKRTTEVSHEIQNKVDVITHHANNTSQSASE 509
           +  +    ++ +V+ ++ V   A  I    +  + V+ E+   V  I   A   S+SA+ 
Sbjct: 450 QSTKAGNDLSLIVTHIKHVSDMATQIATAAEEQSAVAEEMNRNVCGINSSALEVSESATY 509

Query: 510 TREISIDLEHLSQQLESLLNQFTL 533
             + S  L  LS  L + L  F L
Sbjct: 510 LAQESESLAELSLNLNNKLAAFKL 533