Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 545 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  164 bits (416), Expect = 6e-45
 Identities = 113/357 (31%), Positives = 177/357 (49%), Gaps = 26/357 (7%)

Query: 189 IALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSK-DLSHRLENDRKDELGQLAVSINSL 247
           + +F F L L      I  PL      + ++++ + DLS RL    KDE+  LA + N  
Sbjct: 203 VPIFAFFLVL---NHSITSPLNDAIDALEDIAQGEGDLSQRLSTQGKDEVAHLAHAFNLF 259

Query: 248 MDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNITDMQGKQQQV 307
              + D +  +Q    SL + AK+L    + ++Q+A +  +ET  V T +  M     ++
Sbjct: 260 AQKIGDMVGHLQPLGQSLDNDAKQLMLAVEESNQSAEHIHRETGSVATAVNQMLSTTHEM 319

Query: 308 EFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELNNQTGQVSSIL 367
              T++A+   N   +  QQS         D + LV ++ A +    +L   + Q+ SIL
Sbjct: 320 ASNTQQAADAANSVKNQAQQSQAVIDDTVRDTEKLVQELRASEVITQKLGQSSAQIGSIL 379

Query: 368 GVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATGNIENIIAGFQ 427
            VI+ IAEQTNLLALNAAIEAARAG  GRGFAVVADEVR LA+RT ++T  I+ II+   
Sbjct: 380 DVIRSIAEQTNLLALNAAIEAARAGSHGRGFAVVADEVRALANRTQDSTNEIQKIIS--- 436

Query: 428 RDSQASLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQVLSHAMGIQEQTKRTTEVSH 487
            D Q  ++SV    S    +S E++  +      ++ + Q+++H   +  Q    TE   
Sbjct: 437 -DIQMGVNSVMKSNSQTQTQSDELQAKAREAGNAMAAILQLIAHISDMNTQLASATE--- 492

Query: 488 EIQNKVDVITHHANNTSQSASETREISI-----------DLEHLSQQLESLLNQFTL 533
               +  ++T   N    + SE  E+S+            L+ +SQ +   L QF +
Sbjct: 493 ----EQSLVTEEINRNICNISELTEVSVKANEGNSRAAQSLQDISQDMSHTLGQFKI 545