Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  173 bits (439), Expect = 2e-47
 Identities = 111/353 (31%), Positives = 183/353 (51%), Gaps = 1/353 (0%)

Query: 181 IGVGIMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSKDLSHRLENDRKDELGQL 240
           IG+ +  +IAL   ++T   +R II  P+++ +  +  +  SKDL+ R +   +DELG++
Sbjct: 269 IGILVFVIIALILAVITYLIIRSIIT-PVERITQVISRIEVSKDLTLRCDASTQDELGEI 327

Query: 241 AVSINSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNITDM 300
           A   NS++ +    ++QV D+  ++  S K ++  A +  +    Q  ET  V T IT+M
Sbjct: 328 AQHFNSMVGSFQQLIEQVIDSVATINTSCKSVSENAMLASEGVAQQLNETDMVATAITEM 387

Query: 301 QGKQQQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELNNQT 360
                ++   TE A+     T    Q    +       I+ L   I +    + EL   +
Sbjct: 388 GATIDEIAKTTELAALKAGKTHDNAQLGQTEVEQTILKIRQLSEQINSSASVVDELERDS 447

Query: 361 GQVSSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATGNIE 420
             + S+L VI+GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RT  +T  I 
Sbjct: 448 ETIGSVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAMRTQTSTQEIA 507

Query: 421 NIIAGFQRDSQASLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQVLSHAMGIQEQTK 480
           NII   Q  ++A +  +D       + + +       +  + +++  ++  +  I    +
Sbjct: 508 NIIQTLQSRTRAIVQLMDASQKQGAESAEQAAAAGELLKLINTDVHNIMDMSTQIAAAIE 567

Query: 481 RTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLNQFTL 533
             + V+ E+   V VI   A ++S++A      S +L+  ++ L S ++ F +
Sbjct: 568 EQSMVAAEVNKNVVVIRDIAEDSSRAADANASASDELKSRAEYLVSAVSHFKI 620