Pairwise Alignments

Query, 466 a.a., asparagine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., Lysyl-tRNA synthetase (class II) from Pseudomonas stutzeri RCH2

 Score = 57.0 bits (136), Expect = 1e-12
 Identities = 84/343 (24%), Positives = 136/343 (39%), Gaps = 51/343 (14%)

Query: 139 RVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRV--STLDMENLPRTDAGKVD 196
           RVR+ +   I +F  E+ +  V  P++       A + F    + LDM            
Sbjct: 180 RVRSQVISHIRKFLAERHFLEVETPMLQTIPGGAAAKPFETHHNALDMP----------- 228

Query: 197 YNQDFFGKETFLTVSGQLNAEAYACA-ISKVYTFGPTFRAENSNTSRHLAEFWMVEPEVA 255
                     FL ++ +L  +        +V+     FR E  +T RH  EF M+E   A
Sbjct: 229 ---------MFLRIAPELYLKRLVVGGFERVFEINRNFRNEGVST-RHNPEFTMLEFYQA 278

Query: 256 FADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINN--EVIARLEQFVESDFAQVDY 313
           +AD      L E++ + + +AVL     D+  + D++ +  E  ARL  F      + + 
Sbjct: 279 YADYEDNMDLTEELFRELAQAVLGS--TDVP-YGDKVFHFGEPFARLSVF--DSILKYNP 333

Query: 314 TDAIEILKNCGKTFEFPVEWGIDLASEHERF----------LAEEHFKAPVIVKNYPKDI 363
             + + L +  K      + G  L   HE            L E   + P  +  YP ++
Sbjct: 334 EISADDLNDVEKARAIAKKAGAKLLG-HEGLGKLQVMIFEELVEHKLEQPHFITEYPFEV 392

Query: 364 KAFYMRMNEDGKTVAAMDVLAPGIGEIIGG----SQREERLDILDARMREFGI-DPEHMD 418
                R N+    V     L  G  EI       +  E++ +   A++ +    D E M 
Sbjct: 393 SPL-ARRNDRNPNVTDRFELFIGGREIANAYSELNDAEDQAERFHAQVADKDAGDDEAMH 451

Query: 419 WYRDLRR---YGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFP 458
           +  D  R   YG  P AG G+G +RLV  +T   ++RDVI FP
Sbjct: 452 FDADFVRALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFP 494