Pairwise Alignments

Query, 466 a.a., asparagine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 591 a.a., aspartyl-tRNA synthetase, bacterial type from Pseudomonas stutzeri RCH2

 Score = 65.5 bits (158), Expect = 5e-15
 Identities = 78/297 (26%), Positives = 127/297 (42%), Gaps = 54/297 (18%)

Query: 6   VNDVLSGKLAVDSEVTVRGWIRTRRDSKAGISFLAIYDGS-----CFNPIQAVVPNNLNN 60
           +N+ L G+     E+T+ GW+  RRD   G+ FL + D        F+P +A      + 
Sbjct: 10  LNESLDGQ-----EITLCGWVHRRRDH-GGVIFLDVRDREGLAQVVFDPDRAETFATADK 63

Query: 61  YDNEVLKLTTGCSVEVTGKIVESPASGQAFELAASDVKVVGW----VEDADTYPMAKTRH 116
             +E +       V++TGK+   PA      +A+  ++V+G+    + DA+T P     +
Sbjct: 64  VRSEYV-------VKITGKVRLRPAGAVNPNIASGAIEVLGYELDVLNDAETPPFPLNEY 116

Query: 117 SIEYLREVAHLRPR-----TNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAE 171
           S   + E   LR R        +    ++R+ +  +I R+  E G+  V  P++     E
Sbjct: 117 SD--VGEETRLRYRFIDLRRPEMAEKLKLRSRITASIRRYLDENGFLDVETPILGRPTPE 174

Query: 172 GAGEMFRVSTLDMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACA-ISKVYTFG 230
           GA +    S        RT AG      +FF     L  S QL  +    A   + Y   
Sbjct: 175 GARDYLVPS--------RTHAG------NFFA----LPQSPQLFKQLLMVAGFDRYYQIA 216

Query: 231 PTFRAENSNTSRHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEF 287
             FR E+    R   EF  ++ E +F D   +  + E M++ +FK VL     DLEF
Sbjct: 217 KCFRDEDLRADRQ-PEFTQIDIETSFLDEADIIDITEGMIRKLFKEVL-----DLEF 267



 Score = 53.1 bits (126), Expect = 2e-11
 Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 13/119 (10%)

Query: 350 FKAPVIVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDILDARMRE 409
           F AP   K  P++++A     N       A D++  G  E+ GGS R  R ++     R 
Sbjct: 453 FTAP---KCTPQELEA-----NPAAALSRAYDMVLNGT-ELGGGSIRIHRKEMQQTVFRI 503

Query: 410 FGIDP----EHMDWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464
            GID     E   +  D  ++G  PH G   G +RLV  +TG  ++R+VI FP+T  +A
Sbjct: 504 LGIDEAEQEEKFGFLLDALKFGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAA 562