Pairwise Alignments

Query, 466 a.a., asparagine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 599 a.a., aspartyl-tRNA(Asp/Asn) synthetase (EC 6.1.1.23) (from data) from Synechococcus elongatus PCC 7942

 Score = 57.8 bits (138), Expect = 1e-12
 Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 31/180 (17%)

Query: 292 INNEVIARLEQFVESDFAQVDYTDAIEILKNCGKTFEFP-VEWGIDLASEHERFLAEEH- 349
           I N+ + R+ QF+  +   +D  +A+ +L       +FP VEW  D     +R+ A  H 
Sbjct: 410 IVNKSLDRVRQFLGKELGLID-PEALNLLW----VVDFPMVEWNAD----EKRYEALHHP 460

Query: 350 FKAPVIVKNYPKDIKAFYMRMNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDILDARM 407
           F AP      P+D+        ED  T  A   D++  G+ EI GGS R  + DI +   
Sbjct: 461 FTAP-----NPQDL--------EDLTTARAQAYDIVLNGL-EIGGGSLRIYQRDIQERVF 506

Query: 408 REFGIDPEHMD----WYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRS 463
              G+  E       +  +   +GT PH G   G +RLV  +TG  ++RD I FP+T ++
Sbjct: 507 ETIGLSHEEAQAKFGFLLEAFDFGTPPHGGIAYGLDRLVMLLTGEESIRDAIAFPKTQQA 566



 Score = 47.0 bits (110), Expect = 2e-09
 Identities = 66/277 (23%), Positives = 117/277 (42%), Gaps = 39/277 (14%)

Query: 16  VDSEVTVRGWIRTRRDSKAGISFLAIYDGSCFNPIQAVV-PNNLNNYDNEVLKLTTGCSV 74
           V + VT+ GW+  RRD   G+ F+ + D +    +Q V  P       ++   L     V
Sbjct: 14  VGTSVTLYGWVDRRRD-HGGVIFVDLRDRT--GTVQIVSDPERTPESYHQAEGLRNEYVV 70

Query: 75  EVTGKIVESPASGQAFELAASDVKV-VGWVEDADT----YPMAKTRHSIEYLREVAHLR- 128
           ++TG++   PA     +L   +V++    +E  +      P   +    E +RE   LR 
Sbjct: 71  KITGRVSGRPAESLNPKLPTGEVEIYADRIEILNAVRRQLPFQVSSADEETVREDLRLRY 130

Query: 129 ----PRTNVIGAVARVRNCLAQAIHRFYH-EQGYFWVSAPLITASDAEGAGEMF---RVS 180
                R + +    ++R+ + +AI RF   E+ +  +  P++T S  EGA +     RV+
Sbjct: 131 RYLDLRRDRMNRNLQLRHQVVKAIRRFLEDEEQFIEIETPVLTKSTPEGARDYLVPSRVN 190

Query: 181 TLDMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACAISKVYTFGPTFRAENSNT 240
             +   LP++        Q F   +  L VSG            + Y     FR E+   
Sbjct: 191 PGEWFALPQSP-------QLF---KQLLMVSG----------FDRYYQIARCFRDEDLRA 230

Query: 241 SRHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAV 277
            R   EF  ++ E++F     +  L E ++ ++FK V
Sbjct: 231 DRQ-PEFTQLDMEMSFLSQEEIIDLNERLIAHIFKTV 266