Pairwise Alignments

Query, 466 a.a., asparagine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 591 a.a., aspartyl-tRNA synthetase (RefSeq) from Shewanella amazonensis SB2B

 Score = 65.1 bits (157), Expect = 6e-15
 Identities = 59/198 (29%), Positives = 87/198 (43%), Gaps = 27/198 (13%)

Query: 286 EFFNDRINNEVIARLEQ------FVESDFAQVDYTDAIEILKNCGKTF-----EFPVEWG 334
           +F N+ I  E+IAR +       F  +D A V       +    G+ F     E+   W 
Sbjct: 372 KFLNEDIIKEIIARTKAADGDIIFFGADKANVVAESMGALRLKAGEDFKLLEGEWRPLWV 431

Query: 335 IDLASEHE---RFLAEEH-FKAPVIVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEI 390
           +D     +   RF A  H F AP       + + A  +  +       A D++  G+ E+
Sbjct: 432 VDFPMFEKADGRFYAVHHPFTAP-------RGVTAAELEASPGKAVSDAYDMVLNGV-EL 483

Query: 391 IGGSQREERLDILDARMREFGIDPEH----MDWYRDLRRYGTVPHAGFGLGFERLVSYVT 446
            GGS R    D+     R  GID E       +  D  R+GT PHAG   G +RLV  +T
Sbjct: 484 GGGSVRIHNGDMQSTVFRILGIDDEEAKEKFGFLLDALRFGTPPHAGLAFGLDRLVMLMT 543

Query: 447 GMGNVRDVIPFPRTPRSA 464
           G  ++RDV+ FP+T  +A
Sbjct: 544 GASSIRDVMAFPKTTTAA 561



 Score = 48.5 bits (114), Expect = 6e-10
 Identities = 64/270 (23%), Positives = 106/270 (39%), Gaps = 30/270 (11%)

Query: 13  KLAVDSEVTVRGWIRTRRDSKAGISFLAIYDGSCFNPIQAVVPNNLNNYDNEVLKLTTGC 72
           K  V  EVT+ GW+   RD   G+ FL + D      +Q V   +L +  +    L    
Sbjct: 11  KSHVGQEVTLVGWVNRSRDL-GGVIFLDLRDREGL--VQVVYDPDLPDVFDVASSLRAEF 67

Query: 73  SVEVTGKIVESPASGQAFELAASDVKVVGW----VEDADTYPMAKTRH---SIEYLREVA 125
            V+V G +   P S    ++   +++V+G     +  AD  P++   H   S E   +  
Sbjct: 68  CVQVKGVVRPRPDSQVNSQMKTGEIEVLGKALTIINAADPLPLSLDNHQNNSEEARLKYR 127

Query: 126 HLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDME 185
           +L  R   +      R  +   + RF    G+  +  P++T +  EGA +    S     
Sbjct: 128 YLDLRRPEMAQRLIFRAKVTSFVRRFMDGNGFLDIETPILTKATPEGARDYLVPS----- 182

Query: 186 NLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACA-ISKVYTFGPTFRAENSNTSRHL 244
              RT      Y   FF     L  S QL  +    +   + Y     FR E+    R  
Sbjct: 183 ---RT------YKGQFFA----LPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQ- 228

Query: 245 AEFWMVEPEVAFADLNTVAKLAEDMLKYVF 274
            EF  ++ E +F   + V +  E M++ +F
Sbjct: 229 PEFTQIDIETSFMTSDQVMETTERMIRNLF 258