Pairwise Alignments

Query, 466 a.a., asparagine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 598 a.a., aspartate--tRNA ligase from Rahnella sp. WP5

 Score = 62.4 bits (150), Expect = 4e-14
 Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 5/109 (4%)

Query: 360 PKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDILDARMREFGIDP----E 415
           PKD+ A  +  +       A D++  G  E+ GGS R  R ++        GI+     E
Sbjct: 454 PKDMSAEELAADPVSAIANAYDMVINGY-EVGGGSVRIHRSEMQQTVFSILGINEHEQRE 512

Query: 416 HMDWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464
              +  D  +YGT PHAG   G +RLV  +TG  N+RDVI FP+T  +A
Sbjct: 513 KFGFLLDALKYGTPPHAGLAFGLDRLVMLLTGTDNIRDVIAFPKTTAAA 561



 Score = 43.5 bits (101), Expect = 2e-08
 Identities = 61/283 (21%), Positives = 110/283 (38%), Gaps = 41/283 (14%)

Query: 9   VLSGKLA---VDSEVTVRGWIRTRRDSKAGISFLAIYDGS-----CFNPIQAVVPNNLNN 60
           V  GKL    V  EVT+ GW+  RRD   G+ F+ + D        F+P QA      + 
Sbjct: 4   VYCGKLNASNVGQEVTLCGWVNRRRD-LGGLIFIDMRDREGIVQVFFDPDQAEAYKLASE 62

Query: 61  YDNEVLKLTTGCSVEVTGKIVESPASGQAFELAASDVKV----VGWVEDADTYPMAKTRH 116
             NE         +++TG +   P S    ++A  +V+V    +  +  +++ P+     
Sbjct: 63  LRNEF-------CIQLTGTVRARPESQFNKDMATGEVEVFASNLNIINRSESLPLDSNHV 115

Query: 117 SIEYLR-EVAHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGE 175
           + E  R +  +L  R   +    + R  +   + RF     +  +  P++T +  EGA +
Sbjct: 116 NTEEARLKYRYLDLRRPEMANRLKARAKITSFVRRFMDSHDFLDIETPMLTKATPEGARD 175

Query: 176 MFRVSTLDMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACA-ISKVYTFGPTFR 234
               S +                    GK   L  S QL  +    +   + Y     FR
Sbjct: 176 YLVPSRVHK------------------GKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFR 217

Query: 235 AENSNTSRHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAV 277
            E+    R   EF  ++ E +F     V ++ E + + +++ V
Sbjct: 218 DEDLRADRQ-PEFTQIDVETSFMSAEQVREVMEKLARELWQEV 259