Pairwise Alignments

Query, 466 a.a., asparagine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 592 a.a., aspartyl-tRNA synthetase (RefSeq) from Shewanella loihica PV-4

 Score = 53.9 bits (128), Expect = 1e-11
 Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 5/90 (5%)

Query: 379 AMDVLAPGIGEIIGGSQREERLDILDARMREFGIDPEHMD----WYRDLRRYGTVPHAGF 434
           A D++  G  E+ GGS R    ++  A  R  GI+ E       +  +  +YGT PHAG 
Sbjct: 474 AYDMVLNGC-ELGGGSVRIYDAEMQSAVFRILGINDEEAQEKFGFLLEALKYGTPPHAGL 532

Query: 435 GLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464
             G +R+V  +TG  ++RDV+ FP+T  +A
Sbjct: 533 AFGLDRMVMLMTGASSIRDVMAFPKTTTAA 562



 Score = 52.4 bits (124), Expect = 4e-11
 Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 30/271 (11%)

Query: 16  VDSEVTVRGWIRTRRDSKAGISFLAIYDGSCFNPIQAVVPNNLNNYDNEVLKLTTGCSVE 75
           V  EVT+ GW+   RD   G+ FL + D      IQ V   +L    +    L +   V+
Sbjct: 14  VGEEVTLVGWVNRSRDL-GGVVFLDLRDRE--GVIQVVYDPDLPEVFDVASTLRSEFCVQ 70

Query: 76  VTGKIVESPASGQAFELAASDVKVVGW----VEDADTYP--MAKTRHSIEYLR-EVAHLR 128
           V G +   P S    ++   +++V+G     +  A   P  M K +H+ E  R +  +L 
Sbjct: 71  VKGLVRARPDSQINDQMRTGEIEVLGKALTILNSAPALPINMDKNQHNTEEQRLKYRYLD 130

Query: 129 PRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENLP 188
            R   +      R+ +  A+ RF    G+  +  P++T +  EGA +    S        
Sbjct: 131 LRRPEMAERIIFRSKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLVPS-------- 182

Query: 189 RTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACA-ISKVYTFGPTFRAENSNTSRHLAEF 247
           RT      Y   FF     L  S QL  +    +   + Y     FR E+    R   EF
Sbjct: 183 RT------YKGQFFA----LPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQ-PEF 231

Query: 248 WMVEPEVAFADLNTVAKLAEDMLKYVFKAVL 278
             ++ E +F     V    E+M++ +FK +L
Sbjct: 232 TQIDIETSFMTSAQVMDKTEEMVRGLFKELL 262