Pairwise Alignments

Query, 466 a.a., asparagine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 501 a.a., lysyl-tRNA synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 52.0 bits (123), Expect = 5e-11
 Identities = 116/498 (23%), Positives = 180/498 (36%), Gaps = 118/498 (23%)

Query: 16  VDSEVTVRGWIRTRRDSKAGISFLAIYDGS----CFNPIQAVVPNNLNNYDNEVLKLTTG 71
           VD+  T  G I ++R S   ++F  + D S    C+   + +  +   N+     KL  G
Sbjct: 61  VDTRFTCAGRIVSQR-SFGKVTFFHLMDKSGRLQCYTAREVLGEDPYRNFK----KLDIG 115

Query: 72  CSVEVTGKIVESPASGQAFELAASDVKVVGWVEDADTYPM-------AKTRHSIEYLREV 124
             V V+G +  +       EL  S  + +   +     P         +TR+   Y+  +
Sbjct: 116 DIVGVSGTLFRTKTG----ELTLSCDQCILLTKSIRPLPEKYHGLKDVETRYRQRYVDLI 171

Query: 125 AHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRV--STL 182
             + PRT  I    R R  + +   RF  ++G+  V  P++           F    + L
Sbjct: 172 --VTPRTREI---FRKRTLIVREFRRFLEDKGFMEVETPMMQPIPGGATAMPFITHHNAL 226

Query: 183 DMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACAISKVYTFGPTFRAENSNTSR 242
           DM+   R          + + K   L V G            KV+     FR E  +T R
Sbjct: 227 DMQLYMRIAP-------ELYLKR--LLVGG----------FEKVFEINRNFRNEGIST-R 266

Query: 243 HLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAER--------------------- 281
           H  EF M E   A+A    +  L E +  +V + V                         
Sbjct: 267 HNPEFTMCEFYWAYATFEDLMDLTEQLFAHVAEKVCGSYVVTYQGQEVDLTPGRWTRLSF 326

Query: 282 RDDLE--------FFND--RINNEVIARLEQFVESDFAQVDYTDAIEILKNCGKTFEFPV 331
            D LE        F+ND   +   +  R E+ V+ +          ++ K   K F+  V
Sbjct: 327 HDSLEKIGGHKPEFYNDYEAVRKYIRERGEKVVDGE----------KMAKLQAKLFDLDV 376

Query: 332 EWGIDLASEHERFLAEEHFKAPVIVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEII 391
           E  +                 P  + +YP DI     R NE        ++   G  E+ 
Sbjct: 377 EGKLI---------------QPTFIYHYPTDISPLSRRNNERPDVTDRFELFITG-REL- 419

Query: 392 GGSQREERLDILDARMR--------EFGIDPEHM---DWYRDLRRYGTVPHAGFGLGFER 440
            G+   E  D +D RMR        E G    H    D+ R L  YG  P AG G+G +R
Sbjct: 420 -GNAFSELNDPVDQRMRFMDQVAEKEAGDAEAHFMDEDYLRALE-YGMPPAAGEGVGIDR 477

Query: 441 LVSYVTGMGNVRDVIPFP 458
           LV  +T   ++R+VI FP
Sbjct: 478 LVMLLTDSPSIREVILFP 495