Pairwise Alignments

Query, 466 a.a., asparagine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 591 a.a., aspartyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 5/109 (4%)

Query: 360 PKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDILDARMREFGIDPEH--- 416
           P+ +    +  N   +   A D++  G  E+ GGS R    ++  A  R  GI  E    
Sbjct: 454 PRGVTPQELEANPANRVSDAYDMVLNGC-ELGGGSVRIHNQEMQSAVFRILGITDEEAKE 512

Query: 417 -MDWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464
              +  +  RYGT PHAG   G +R++  +TG  ++RDV+ FP+T  +A
Sbjct: 513 KFGFLLEALRYGTPPHAGLAFGLDRIIMLMTGASSIRDVMAFPKTTTAA 561



 Score = 52.4 bits (124), Expect = 4e-11
 Identities = 73/318 (22%), Positives = 122/318 (38%), Gaps = 33/318 (10%)

Query: 13  KLAVDSEVTVRGWIRTRRDSKAGISFLAIYDGSCFNPIQAVVPNNLNNYDNEVLKLTTGC 72
           K  V  EVT+ GW+   RD   G+ FL + D      +Q V   +L    N    L    
Sbjct: 11  KSHVGQEVTLVGWVNRSRDL-GGVVFLDLRDREGL--VQVVYDPDLPEVFNVASTLRAEF 67

Query: 73  SVEVTGKIVESPASGQAFELAASDVKVVGW----VEDADTYPMAKTRH---SIEYLREVA 125
            V+V G +   P S    ++   +++V+G     +  ++  P++   +   S E   +  
Sbjct: 68  CVQVKGVVRARPDSQVNAQMKTGEIEVLGKALTIINSSEPLPLSLDNYQNNSEEQRLKYR 127

Query: 126 HLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDME 185
           +L  R   +      R  +  A+ RF    G+  +  P++T +  EGA +    S     
Sbjct: 128 YLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVPS----- 182

Query: 186 NLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACA-ISKVYTFGPTFRAENSNTSRHL 244
              RT      Y   FF     L  S QL  +    +   + Y     FR E+    R  
Sbjct: 183 ---RT------YKGQFFA----LPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQ- 228

Query: 245 AEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIARLEQFV 304
            EF  ++ E +F     V    E+M++ +F  +L     DL  F     NE + R     
Sbjct: 229 PEFTQIDIETSFMTSEQVMNKTEEMMRGLFLEML---NVDLGEFPRMTYNEAMRRFGSDK 285

Query: 305 ESDFAQVDYTDAIEILKN 322
                 ++  D  ++LK+
Sbjct: 286 PDLRNPLELVDVADLLKD 303