Pairwise Alignments

Query, 466 a.a., asparagine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 591 a.a., aspartyl-tRNA synthetase (RefSeq) from Shewanella sp. ANA-3

 Score = 57.8 bits (138), Expect = 1e-12
 Identities = 57/199 (28%), Positives = 89/199 (44%), Gaps = 27/199 (13%)

Query: 285 LEFFNDRINNEVIARLEQ------FVESDFAQVDYTDAIEILKNCGKTF-----EFPVEW 333
           L+F N+ I NE+I+R            +D A V       +    G+ F     ++   W
Sbjct: 371 LKFLNEGIVNEIISRTGAQTGDIILFGADNATVVAESMGALRLKAGEDFNLLEGQWRPLW 430

Query: 334 GIDLASEHE---RFLAEEH-FKAPVIVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGE 389
            +D     +    F A  H F AP  V   P++++A     N   +   A D++  G  E
Sbjct: 431 VVDFPMFEKINGSFHAVHHPFTAPRGVT--PQELEA-----NPANRVSDAYDMVLNGC-E 482

Query: 390 IIGGSQREERLDILDARMREFGIDPEH----MDWYRDLRRYGTVPHAGFGLGFERLVSYV 445
           + GGS R    ++  A  R  GI  E       +  +  RYGT PHAG   G +R++  +
Sbjct: 483 LGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLAFGLDRIIMLM 542

Query: 446 TGMGNVRDVIPFPRTPRSA 464
           TG  ++RDV+ FP+T  +A
Sbjct: 543 TGASSIRDVMAFPKTTTAA 561



 Score = 51.6 bits (122), Expect = 7e-11
 Identities = 73/317 (23%), Positives = 121/317 (38%), Gaps = 33/317 (10%)

Query: 13  KLAVDSEVTVRGWIRTRRDSKAGISFLAIYDGSCFNPIQAVVPNNLNNYDNEVLKLTTGC 72
           K  V  EVT+ GW+   RD   G+ FL + D      +Q V   +L    N    L    
Sbjct: 11  KSHVGQEVTLVGWVNRSRDL-GGVVFLDLRDREGL--VQVVYDPDLPEVFNVASTLRAEF 67

Query: 73  SVEVTGKIVESPASGQAFELAASDVKVVGW----VEDADTYPMAKTRH---SIEYLREVA 125
            V+V G +   P S    ++   +++V+G     +  ++  P++   +   S E   +  
Sbjct: 68  CVQVKGVVRARPDSQVNAQMKTGEIEVLGKELTIINSSEPLPLSLDNYQNNSEEQRLKYR 127

Query: 126 HLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDME 185
           +L  R   +      R  +  A+ RF    G+  +  P++T +  EGA +    S     
Sbjct: 128 YLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVPS----- 182

Query: 186 NLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACA-ISKVYTFGPTFRAENSNTSRHL 244
              RT      Y   FF     L  S QL  +    +   + Y     FR E+    R  
Sbjct: 183 ---RT------YKGQFFA----LPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQ- 228

Query: 245 AEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIARLEQFV 304
            EF  ++ E +F     V    E+M++ +F  +L     DL  F     NE + R     
Sbjct: 229 PEFTQIDIETSFMTSEQVMAKTEEMMRGLFLEML---NVDLGEFPRMTYNEAMRRFGSDK 285

Query: 305 ESDFAQVDYTDAIEILK 321
                 ++  D  ++LK
Sbjct: 286 PDLRNPLELVDVADLLK 302