Pairwise Alignments

Query, 282 a.a., bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 581 a.a., phosphomethylpyrimidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  143 bits (360), Expect = 1e-38
 Identities = 114/313 (36%), Positives = 149/313 (47%), Gaps = 55/313 (17%)

Query: 6   SIHTPIVLTIAGSDSGGGAGIQADIKAISATGGYACSVITAITAQNTQGVSAVFPLPLAV 65
           S   PIV TIAGSDSGGGAGIQAD+  ++    + CSVIT +TAQN+  V+ V P+  A+
Sbjct: 2   SAEKPIVWTIAGSDSGGGAGIQADLATMADLDCHGCSVITCVTAQNSVAVNGVEPVSEAI 61

Query: 66  VEQQLDAVFSDIPVLAVKIGMLADAPIIALVAKKLRQY---------QPKWIVLDPVMIS 116
           +  QLD +  D+P  A+KIG+LA+   I LVA  L  +         QP  I+LDPVM++
Sbjct: 62  LLAQLDTLLVDLPPRAIKIGLLANQRQINLVADWLATHMAPLKTDDGQPIPIILDPVMVA 121

Query: 117 TSGHHLLAAEAVET-------------------LKRE-----------LLPLANLITPNL 146
           + G  L    AV+                    LK E              L  L+TPN 
Sbjct: 122 SCGDALTGESAVQASAQTKTKPKTKLKTKPKTELKTEPKHLAGLDFTPFAKLLTLVTPNA 181

Query: 147 PEAAVLAGMTQQEWQQNPQQGITVLSQLNTPAVLLKGGHDHQQANSD---DLLI------ 197
            E   L G       +   Q  + LS+     +L+ GG       SD   DL I      
Sbjct: 182 SEFGKLVGSEASSSDEMLAQA-SALSRRLVCNLLITGGDKGSLWYSDKAEDLFICNAVAH 240

Query: 198 ----QSGDSRHFCAPRIATKNTHGTGCSLSSAIASYLAQGAELVEAVDKAKQYIHQAIVH 253
                   S      R+   N HG+GC+LSSAIAS+LAQG  L +A+  AK Y+ Q I  
Sbjct: 241 TSPLHQHTSFRLSGERVDNPNHHGSGCTLSSAIASFLAQGLVLHDAILLAKTYVGQGIAP 300

Query: 254 ADQLRIGQGYGPI 266
           A  L  G G GP+
Sbjct: 301 AKAL--GAGAGPL 311