Pairwise Alignments

Query, 637 a.a., cyclic nucleotide-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., Predicted signal-transduction protein containing cAMP-binding and CBS domains from Pseudomonas fluorescens FW300-N2E2

 Score =  239 bits (610), Expect = 3e-67
 Identities = 173/634 (27%), Positives = 299/634 (47%), Gaps = 34/634 (5%)

Query: 18  QFLQQHPPFDALPNERLPEIAQQIEIAYFRKDTPIIGYKQA-ISDLYLVRSGAVEVYRRH 76
           QFLQ+ PPF+ + N  L  + +Q  + ++     II      +   Y+V+ G V   R H
Sbjct: 26  QFLQRFPPFNQMENAHLAYLVEQCLLRFYAPGETIIKPADGPVEHFYIVKQGRVVGERPH 85

Query: 77  G-----ELYNRLTEGSLFGQMGLLTRNQVSFAVTAIEDTLLYCLPEALFHRLHQEFDSFA 131
                 E    +T G  F    LL          A EDT    L +  F +L      F 
Sbjct: 86  TAKGGTETTFEITTGECFPLAALLGERATRTEHRAGEDTFCLQLNKLAFIKLFALSGPFR 145

Query: 132 DFV---------EVEQAVRLR--QTVAKQKEQNDLITSKVKQLLTRSAPTIDKQASIQQA 180
           DF          +V Q V+ +  QT+  Q   N    +++ +L  R   +      +++A
Sbjct: 146 DFALRGVSSLLDQVNQQVQQKSAQTLGTQYSLN----TRLGELAMRHPVSCSPDTPLREA 201

Query: 181 AQRMADENVSALLILDNQILLDTEDDSTPMVGIVTERDLCRRVLAQGM-DVTQTVSQVMT 239
            + M D+ V ++++++ Q            VGI T RDL R+V+A G  D +Q +   MT
Sbjct: 202 VKLMHDQQVGSIVVVNEQ---------KAPVGIFTLRDL-RQVVADGAGDFSQAIVGHMT 251

Query: 240 HEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGIIDMTDIVRHESQNSLLLVSRIY 299
                L  +   ++A +AM   ++ H+ ++++++  G++   D+   +  + + L   I 
Sbjct: 252 QAPFFLSPDHSAFDAAIAMTERHIAHVCLVKDQRLCGVVSERDLFSLQRVDLVHLARTIR 311

Query: 300 QQTCIDDLAQLANEVKASFVRLVNEDANSHMIGTAMSTIGRAFTQRIIELVEAELGAAPL 359
               +++L  L  E+     R++   A+S  I   ++ +      R+IEL   + G   +
Sbjct: 312 NAPKVENLVALRGEIGQLVERMLAHGASSTQITHIITLLNDHTVCRVIELTLLDKGDPGV 371

Query: 360 PYCFVAFGSMGRDEQLIVTDQDNALILD--DRYDVQQHGAYFAQFAELVCRGLDRCGYPL 417
           P+ ++ FGS GR EQ + TDQDN ++ +  D     Q        A+ + + L  CG+ L
Sbjct: 372 PFSWLCFGSEGRREQTLHTDQDNGILFEARDAAHAAQIRGLLLPIAQQINQSLALCGFTL 431

Query: 418 CDGEIMASNPKWRMTRKEWETCFADWIDNPNPQALLNASIFFDLDGVYGRTKWAEQLSGF 477
           C G IMA NP+  ++R EW   F+ +I    P+ LL +SI+FDL  V+G  +  EQL   
Sbjct: 432 CKGNIMAGNPELCLSRAEWARRFSAFIREATPENLLGSSIYFDLRVVWGDEQGCEQLRRQ 491

Query: 478 IVRRARRNQRFLACLARNALNRTPPLGFFKNFVMEKDGRHNNSINLKRRGTAPLADLIRV 537
           I+ +   N+ F   +A NAL   PP+G F++FV+ +      +++LK +G  P  D  R+
Sbjct: 492 ILDQVADNRLFQRMMAENALRHRPPVGRFRDFVLSRKNGEKATLDLKVQGLTPFVDGARL 551

Query: 538 HALAAGSRAKNSFERLDDVIEAGLLPQGKGKDLRDALEFIAMVRIRHQAIDVEQEREADN 597
            ALA G  A N+ ERL  +++  ++    G    +A  FI   R++   +   +     N
Sbjct: 552 LALANGIEANNTLERLRQLVDKQVIEPLDGAAYEEAYHFIQQTRMQQHQLQTRENLPYSN 611

Query: 598 SIEPEHLSDFERRNLKDAFQILSNGQNYLKYRYQ 631
            ++P+ L+  +RR L+++ +     Q+ L  RYQ
Sbjct: 612 RVDPDSLNHLDRRILRESLRQAQRLQSSLTLRYQ 645