Pairwise Alignments

Query, 637 a.a., cyclic nucleotide-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., cyclic nucleotide-binding protein from Pseudomonas fluorescens FW300-N2E3

 Score =  244 bits (622), Expect = 1e-68
 Identities = 176/634 (27%), Positives = 303/634 (47%), Gaps = 34/634 (5%)

Query: 18  QFLQQHPPFDALPNERLPEIAQQIEIAYFRKDTPIIGYKQA-ISDLYLVRSGAVEVYRRH 76
           QFLQ+ PPF+ + +  L  + +Q ++ ++     II      +   Y+V+ G V   R H
Sbjct: 26  QFLQRFPPFNQMEHAHLAYLVEQCQLRFYGPGESIIKPADGPVEHFYIVKQGRVVGERPH 85

Query: 77  G-----ELYNRLTEGSLFGQMGLLTRNQVSFAVTAIEDTLLYCLPEALFHRLHQEFDSFA 131
                 E    +T G  F    LL          A EDT    L +  F +L     +F 
Sbjct: 86  TAKGGTETTFEITTGECFPLAALLGERATRTEHLAAEDTFCLQLNKQAFIKLFALSSTFR 145

Query: 132 DFV---------EVEQAVRLR--QTVAKQKEQNDLITSKVKQLLTRSAPTIDKQASIQQA 180
           DF          +V Q V+ +  +T+  Q   N    +++ +L  R   T      +++A
Sbjct: 146 DFALRGVSSLLDQVNQQVQQKAVETLGTQYSLN----TRLGELAMRHPVTCSPATPLREA 201

Query: 181 AQRMADENVSALLILDNQILLDTEDDSTPMVGIVTERDLCRRVLAQGM-DVTQTVSQVMT 239
              M ++ V +++++D Q          P+ GI T RDL R+V+A G  D  Q + + M 
Sbjct: 202 VTLMHEQQVGSIVVVDEQ--------KAPL-GIFTLRDL-RQVVADGTSDFNQPIDRHMI 251

Query: 240 HEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGIIDMTDIVRHESQNSLLLVSRIY 299
           H    L  +   ++A +AM   ++ H+ ++++++  G++   D+   +  + + L   I 
Sbjct: 252 HAPFFLTPDHSAFDAAIAMTERHIAHVCLVKDQRLCGVVSERDLFSLQRVDLVHLARTIR 311

Query: 300 QQTCIDDLAQLANEVKASFVRLVNEDANSHMIGTAMSTIGRAFTQRIIELVEAELGAAPL 359
               +++L  +  E+     R++   A+S  I   ++ +      R+IEL  A+ G   +
Sbjct: 312 SAPRVENLVAMRGEIGQLVERMLAHGASSTQITHIITLLNDHTVCRVIELTLADKGDPGI 371

Query: 360 PYCFVAFGSMGRDEQLIVTDQDNALILDDRYDVQ--QHGAYFAQFAELVCRGLDRCGYPL 417
           P+ ++ FGS GR EQ + TDQDN ++ + R  VQ  +  +     A+ + + L  CG+ L
Sbjct: 372 PFSWLCFGSEGRREQTLHTDQDNGILFEARDAVQAAEIRSKLLPIAQQINQSLALCGFTL 431

Query: 418 CDGEIMASNPKWRMTRKEWETCFADWIDNPNPQALLNASIFFDLDGVYGRTKWAEQLSGF 477
           C G IMA NP+  ++R EW   FA +I    P+ LL +SI+FDL  V+G  +  EQL   
Sbjct: 432 CKGNIMAGNPQLCLSRAEWARRFAAFIREATPENLLGSSIYFDLRVVWGDEQGCEQLRRA 491

Query: 478 IVRRARRNQRFLACLARNALNRTPPLGFFKNFVMEKDGRHNNSINLKRRGTAPLADLIRV 537
           I+ +   N+ F   LA NAL + PP+G F+ FV+EK      +++LK +G  P  D  R+
Sbjct: 492 ILDQVADNRLFQRMLAMNALRQRPPVGRFREFVLEKKNGEKATLDLKVQGLTPFVDGARL 551

Query: 538 HALAAGSRAKNSFERLDDVIEAGLLPQGKGKDLRDALEFIAMVRIRHQAIDVEQEREADN 597
            ALA G  A N+ ER   ++   ++    G    +A  FI   R++       +     N
Sbjct: 552 LALAHGIGANNTLERFRQLVAKEVIDPLDGAAYEEAYHFIQQTRMQQHQRQTRENLPYSN 611

Query: 598 SIEPEHLSDFERRNLKDAFQILSNGQNYLKYRYQ 631
            ++P+ L+  +RR L+++ +     Q+ L  RYQ
Sbjct: 612 RVDPDSLNHLDRRILRESLRQAQRLQSSLALRYQ 645