Pairwise Alignments

Query, 637 a.a., cyclic nucleotide-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 644 a.a., Predicted signal-transduction protein containing cAMP-binding and CBS domains from Pseudomonas stutzeri RCH2

 Score =  249 bits (635), Expect = 3e-70
 Identities = 173/631 (27%), Positives = 295/631 (46%), Gaps = 28/631 (4%)

Query: 18  QFLQQHPPFDALPNERLPEIAQQIEIAYFRKDTPIIGYKQAI-SDLYLVRSGAVEVYRRH 76
           +FL+++ PF+ +    L  + +  E+ ++ +   II     +    Y+V+ G V   R H
Sbjct: 24  EFLRKYAPFNQMEPAHLTFLVENCELRFYAEGDCIISPDDGVVQHFYIVKQGRVHGQRPH 83

Query: 77  GELYNRLTE-----GSLFGQMGLLTRNQVSFAVTAIEDTLLYCLPEALFHRLHQEFDSFA 131
                  T      G  F    L+       A  A EDT  + L +  F +L      F 
Sbjct: 84  TAKRGTDTTFEVIVGECFPMAALMGERATRTAHLAAEDTFCFLLNKPAFVKLVSSSPVFR 143

Query: 132 DFVE---------VEQAVRLRQTVAKQKEQNDLITSKVKQLLTRSAPTIDKQASIQQAAQ 182
           DF           V Q  ++R  V    EQ  L TS + +L      +      + +A  
Sbjct: 144 DFAMRGVSSLLDLVNQQAQMR-AVESLGEQYSLETS-IGELALHHPVSCLPSRPLNEAVA 201

Query: 183 RMADENVSALLILDNQILLDTEDDSTPMVGIVTERDLCRRVLAQGMDVTQTVSQVMTHEV 242
            M  ENV +++I+D         ++    GI T RDL R +     D++Q +SQ MTH+ 
Sbjct: 202 MMQQENVGSIVIVD---------EALHPQGIFTLRDLRRAIGTGTTDLSQPISQFMTHDP 252

Query: 243 ISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGIIDMTDIVRHESQNSLLLVSRIYQQT 302
             L  +A  ++A +AM   ++ H+ V+      G+I   D+   +  + + L   I    
Sbjct: 253 FYLPPDATAFDAAIAMTERHIAHVCVVENGLLQGVISERDLFSLQRVDLVHLAQTIRHAD 312

Query: 303 CIDDLAQLANEVKASFVRLVNEDANSHMIGTAMSTIGRAFTQRIIELVEAELGAAPLPYC 362
            +D L  + + +      ++   A+S  I   ++ +      R+IEL    +G   +P+ 
Sbjct: 313 RVDALVVIRSRIAQLVDNMLAHGASSTQITHIVTLLNDHTVCRVIELAIEHMGDPGVPFT 372

Query: 363 FVAFGSMGRDEQLIVTDQDNALILD--DRYDVQQHGAYFAQFAELVCRGLDRCGYPLCDG 420
           ++ FGS GR EQ + TDQDN ++ +  D  +           AE + R LD CG+ LC G
Sbjct: 373 WLCFGSEGRQEQTLYTDQDNGILFEAADAAEAAHIRGRLLPLAERINRDLDTCGFSLCKG 432

Query: 421 EIMASNPKWRMTRKEWETCFADWIDNPNPQALLNASIFFDLDGVYGRTKWAEQLSGFIVR 480
            IMASNP+  ++R+EW   F+ ++    P+ LL ++I+FDL  ++G ++  EQL   ++ 
Sbjct: 433 NIMASNPQLCLSRQEWSRRFSSFVREATPENLLGSTIYFDLRSIWGPSEGCEQLRRDLLD 492

Query: 481 RARRNQRFLACLARNALNRTPPLGFFKNFVMEKDGRHNNSINLKRRGTAPLADLIRVHAL 540
             + N  F   +A NAL   PP+G F++FV+ + G   ++++LK +G  P  D  R+ AL
Sbjct: 493 EIKGNSLFQRMMADNALRHRPPVGRFRDFVVARKGEGKDTLDLKVQGLTPFVDGARLLAL 552

Query: 541 AAGSRAKNSFERLDDVIEAGLLPQGKGKDLRDALEFIAMVRIRHQAIDVEQEREADNSIE 600
           +      N+ ERL  ++E G++ +  G    +A  FI   R++H       E    N ++
Sbjct: 553 SNDIGTCNTLERLRKLVEKGVIEKKDGAAYEEAYHFIQQTRMQHHQQQARDELPYSNRLD 612

Query: 601 PEHLSDFERRNLKDAFQILSNGQNYLKYRYQ 631
           P+ L+  +RR L+++F+     Q  L  RYQ
Sbjct: 613 PDTLNVLDRRILRESFRQAQRLQASLAVRYQ 643