Pairwise Alignments

Query, 637 a.a., cyclic nucleotide-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 604 a.a., Cyclic nucleotide-binding domain (cNMP-BD) protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  175 bits (444), Expect = 5e-48
 Identities = 147/610 (24%), Positives = 259/610 (42%), Gaps = 24/610 (3%)

Query: 25  PFDALPNERLPEIAQQIEIAYFRKDTPIIGYKQAISDLYLVRSGAVEVYRRHGELYNRLT 84
           PFD L      ++    +IAYF     + G  +    L++V  G V   R   +L     
Sbjct: 10  PFDLLAPAERDKLQGGADIAYFTAGERLTGPDRPGDALFVVMKGLV-AEREGDDLLTVHG 68

Query: 85  EGSLFGQMGLLTRNQVSFAVTAIEDTLLYCLPEALFHRLHQEFDSFADFVEVEQAVRLRQ 144
            G   G + L+     +    A E+T+ + +P  L   L +   +F  F       RL  
Sbjct: 69  AGDCVGALALI-HGTPALICEAQEETIAHVIPRQLVLDLCRSNAAFERFFATSLGDRLAS 127

Query: 145 TVAKQKEQN--DLITSKVKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLD 202
               +  +     + +KV +        +     ++ AA  M     ++LL+        
Sbjct: 128 HAQTRHLRGVAGFMVAKVGEAYLHPPIFVSGTLGLRDAALLMKRHRATSLLVTG------ 181

Query: 203 TEDDSTPMVGIVTERDLCRRVLAQGMDVTQTVSQVMTHEVISLDHNAYVYEAMLAMLRNN 262
               +   VG+++  DL    + +   ++  V    T + + +D + +++ A + M R+ 
Sbjct: 182 ----ADGRVGVLSGSDLREWAIIREQPLSTPVEACATFDTVFVDVDDFLFNAQVLMTRHG 237

Query: 263 VHHLPVLRERQPIGIIDMTDIVRHESQNSLLLVSRIYQQTCIDDLAQLANEVKASFVRLV 322
           +  LPV R+   IG+++M D++ + S ++ L+  RI +   +DDLA  A  +      + 
Sbjct: 238 IRRLPVRRDGAVIGVLEMIDLLGYMSSHAHLVALRIDRADTLDDLALAAQALDPLIQGMG 297

Query: 323 NEDANSHMIGTAMSTIGRAFTQRIIELV-EAELGAAPLPYCFVAFGSMGRDEQLIVTDQD 381
                   +   +S + R   +++  L+ + E+  +    C V  GS GR EQL  TDQD
Sbjct: 298 GSGVRLRDVARMVSDLSRKLQRKLFSLIADPEIAQS---CCLVVMGSEGRGEQLAKTDQD 354

Query: 382 NALILDDRYDVQQHGAYFAQFAELVCRGLDRCGYPLCDGEIMASNPKWRMTRKEWETCFA 441
           NALI+ D  D +       +F E +       GYP C G +M SNP W  +         
Sbjct: 355 NALIIKDGIDPESLRGLCNRFTEAMLT----FGYPPCPGGMMVSNPAWAKSESALRDDVY 410

Query: 442 DWIDNPNPQALLNASIFFDLDGVYGRTKWAEQLSGFIVRRARRNQRFLACLARNALNRTP 501
            WI +P+    LN + F D + V G      +L   +  R R N  FL+  AR  L    
Sbjct: 411 GWITSPSEIGFLNLAAFIDAEAVAGDGAMLARLKTLLFARLRGNSAFLSLFARPILAFDT 470

Query: 502 PLGFFKNFVMEKDGRHNNSINLKRRGTAPLADLIRVHALAAGSRAKNSFERLDDVIEAGL 561
           PLGFF   +++  G     +++K+ G  P+   +R  AL       ++F+R++ +   G 
Sbjct: 471 PLGFFHQLLID-HGSAGGGLDVKKGGIFPIVHGVRALALEHAITETSTFDRIEALRGLGA 529

Query: 562 LPQGKGKDLRDALEFIAMVRIRHQAIDVEQE-READNSIEPEHLSDFERRNLKDAFQILS 620
           L  G   DL +AL+ +  +R+  +     Q+   AD  I    L+  +   L+DA  I+ 
Sbjct: 530 LDDGVATDLVEALQALMALRLEARLGRSPQDGAVADTLIRAGSLTRSQHTALRDALLIVK 589

Query: 621 NGQNYLKYRY 630
             +  L + +
Sbjct: 590 RFKALLTHHF 599