Pairwise Alignments

Query, 637 a.a., cyclic nucleotide-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 574 a.a., CBS domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  140 bits (354), Expect = 1e-37
 Identities = 119/440 (27%), Positives = 192/440 (43%), Gaps = 34/440 (7%)

Query: 170 TIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTERDLCRRVLA-QGM 228
           T+D++ S+ +AA RM +  VSA+L+           ++T   GI+TERD+ R V   +GM
Sbjct: 43  TLDRETSLGEAAARMVEAQVSAVLV----------GEATRPEGIITERDITRLVAEHRGM 92

Query: 229 DVTQTVSQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLR-ERQPIGIIDMTDIVRHE 287
              + + +VM   V+++   +   EA+L M  + + HL V+  E  P GI++  D++  +
Sbjct: 93  AHARPLGRVMRGGVVTIGEGSTTGEAVLRMAEHGIRHLLVVSGEGTPRGILEERDLLSGD 152

Query: 288 SQNSLLLVSRIYQQTCIDDLAQLANEVKASFVRLVNEDANSHMIGTAMSTIGRAFTQRII 347
           + +   + S I   T    L      +     R  +E   +  +G  ++ +      R  
Sbjct: 153 TASPFAVASAIDTSTDATALGMAHETLHRLIRRYTSEGIAAVRLGRIVAGLRDRLVTRAA 212

Query: 348 ELVEAELGAAP-LPYCFVAFGSMGRDEQLIVTDQDNALILDDRY-DVQQHG--AYFAQFA 403
            L    +   P  P+     GS  R EQ   TDQD AL+L D   D+      A+FA+F 
Sbjct: 213 HLALQTMPTPPPSPFAVGVLGSHARREQFFATDQDVALVLSDASGDIPPDAVAAWFARFG 272

Query: 404 ELVCRGLDRCGYPLCDGEIMASNPKWRMTRKEWETCFADWIDNPNPQALLNASIFFDLDG 463
           E + + L   G P C   IM S+P WR T + W T        P+  A++  SI  DL G
Sbjct: 273 EALAQMLVHAGLPPCPHGIMPSSPAWRRTMRSWRTVVDGACRTPDAPAVVTLSILADLRG 332

Query: 464 VYGRTKWAEQLSGFIVRRARRNQRFLACLARNALNRTPPLGFFKNFVMEKDGRHNNSINL 523
           +        +L+  +  R       L  + R A+   P LG F    + +DG+    I+L
Sbjct: 333 LNDGFDLCPRLTDHLCHRLATTSLPLRLMGREAVRHAPKLGMFNRLPVIRDGKDGEYIDL 392

Query: 524 KRRGTAPLADLIRVHAL---------------AAG---SRAKNSFERLDDVIEAGLLPQG 565
           KR G   L    R  AL               AAG   +   ++  RL  + + G+    
Sbjct: 393 KRCGLFTLMQGARALALERAGASVSGNASHNDAAGRGITSPSDTASRLAALRQCGIPGGE 452

Query: 566 KGKDLRDALEFIAMVRIRHQ 585
            G D+  A + +  +R+R Q
Sbjct: 453 LGDDIAHAWDVLLGLRLRGQ 472



 Score = 26.6 bits (57), Expect = 0.003
 Identities = 16/52 (30%), Positives = 25/52 (48%)

Query: 234 VSQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGIIDMTDIVR 285
           +S ++ H  ++LD    + EA   M+   V  + V    +P GII   DI R
Sbjct: 33  LSSLVLHPPLTLDRETSLGEAAARMVEAQVSAVLVGEATRPEGIITERDITR 84