Pairwise Alignments

Query, 236 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 223 a.a., DNA polymerase III epsilon subunit (EC 2.7.7.7) from Pseudomonas fluorescens FW300-N2E2

 Score = 49.7 bits (117), Expect = 5e-11
 Identities = 42/179 (23%), Positives = 72/179 (40%), Gaps = 10/179 (5%)

Query: 38  GSTPIHQCSLVALDFETTGLNAEQDAIVSIGLVPFTTQRIFLSQARYWLVKPSQPLEDES 97
           G   + +   V LD ETTGLN  +D ++SIG V      I  SQ     ++  +     S
Sbjct: 20  GECDLREQRWVVLDLETTGLNLNKDQVLSIGAVVIEDGAIDFSQQFERTLQCDKQKLGPS 79

Query: 98  IVFHGITHSELQHAQAPEQVLKELLEALHGKIVVVHFRHIERDFLRQISLNIWGEAIEFP 157
           ++ HG+  S +     P + L   +E +    ++      +   L +   +  G  ++  
Sbjct: 80  VLIHGLAPSAIAAGSDPAEALLAFMEFVGDSPLLAFHAPFDSHMLGRALKDYLGYRLQHS 139

Query: 158 VLDTLEIERQLLDKQRSLWQRIARRPLPSIRLGQSRMRYHLPPYSPHHALTDAIATAEL 216
            LD  ++   L  +            L    L +    + L  +  H+A  DA+ATAEL
Sbjct: 140 FLDVADLAPMLCPQAN----------LRKSGLDEWIDWFKLQVFDRHNASADALATAEL 188