Pairwise Alignments

Query, 236 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., DNA polymerase III, epsilon subunit, Proteobacterial from Pseudomonas stutzeri RCH2

 Score = 42.7 bits (99), Expect = 6e-09
 Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 9/142 (6%)

Query: 48  VALDFETTGLN-AEQDAIVSIGLVPFTTQRIFLSQARYWLVKPSQPLEDESIVFHGITHS 106
           V LD ETTG+  A+   I+ IG V    +R+       +L +P + +++ +I  HGIT+ 
Sbjct: 4   VVLDTETTGMPVADGHRIIEIGCVEVIGRRLTGRHYHVYL-QPDREVDEGAIAVHGITNE 62

Query: 107 ELQHAQAPEQVLKELLEALHGKIVVVHFRHIERDFLRQISLNIWGE------AIEFPVLD 160
            L        V  E  E + G  +V+H    +  F+      + G+      A    VLD
Sbjct: 63  FLVDKPRFRDVADEFFEFIKGAQLVIHNAAFDLGFINN-EFALLGQQERADIAEHCSVLD 121

Query: 161 TLEIERQLLDKQRSLWQRIARR 182
           TL + R+    QR+    + +R
Sbjct: 122 TLLMARERHPGQRNSLDALCKR 143